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Keep only project-specific agent instructions - #97

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parashardhapola merged 3 commits into
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trim-agent-instructions
Oct 29, 2026
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parashardhapola merged 3 commits into
masterfrom
trim-agent-instructions

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docs/AGENTS.md no longer asks agents to check with the user before running the quickstart notebook, which submits a real annotation job; the facts about that job stay. The general rules on notebook comments, checking code in Markdown pages and HTML comments are removed, and the docs tests still check for HTML comments. One commit puts each paragraph on one line and changes only line breaks.

docs/AGENTS.md no longer asks agents to check with the user before
running the quickstart notebook, which submits a real annotation job.
The facts about that job stay: it needs a saved sign-in, counts toward
the account's job limits and waits for the result.
Only line breaks change: each paragraph and list item now sits on one
line. The rendered text is unchanged.
The rules to comment each logical step of notebook code, to check code
in Markdown pages against the source and to leave no HTML comments in
published pages are not specific to CyteType, so they go. The docs
tests still check for HTML comments, and where to track pending work
stays.
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@parashardhapola
parashardhapola merged commit c4a77dd into master Oct 29, 2026
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parashardhapola deleted the trim-agent-instructions branch October 29, 2026 13:46
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