bedtools - the swiss army knife for genome arithmetic
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Updated
Jun 10, 2026 - C
bedtools - the swiss army knife for genome arithmetic
Oxford Nanopore's Basecaller
The modern C++ library for sequence analysis. Contains version 3 of the library and API docs.
IQ-TREE software version 2: phylogenetics by maximum likelihood
Single-cell analysis in Python. Scales to >100M cells.
Foundation Models for Genomics & Transcriptomics
A comprehensive library for computational molecular biology
📖🔬☕ BioJava is an open-source project dedicated to providing a Java library for processing biological data.
scikit-bio: a community-driven Python library for bioinformatics, providing versatile data structures, algorithms and educational resources.
The second version of the Kraken taxonomic sequence classification system
Official git repository for Biopython (originally converted from CVS)
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