graphlets

a python library for cheminformatics and machine learning

MiNAA aligns a pair of networks based their topologies and biologies.

[WWW'25] Official implementation of "Beyond Neighbors: Distance-Generalized Graphlets for Enhanced Graph Characterization"

GRAph ALigner: Algorithm to align two networks or graphs. This implementation is specific for program dependency graph to detect code similarity.

Counts exact frequencies of typed graphlets up to size 5 in heterogeneous networks, enabling semantically rich structural analysis of complex graphs.

MATLAB scripts and functions for Microbial Network Analysis (MNA)

Clustering of Twitter Networks with Orbital Signature Embeddings

Orbit counting algorithm: for counting graphlet degree vector(automorphism orbits) of 4/5 node graphlets in the host graph.

EpiGraph is a Fiji plugin that combines computational geometry and graph theory to measure the degree of arrangement in any computational or natural tessellation.

An Atomic Graphlet—Graph Logical Inference Database Engine Prototype