[pre-commit.ci] pre-commit autoupdate

.pre-commit-config.yaml

@@ -7,7 +7,7 @@ default_stages:
 minimum_pre_commit_version: 2.16.0
 repos:
   - repo: https://github.com/biomejs/pre-commit
-    rev: v2.4.4
+    rev: v2.4.6
     hooks:
       - id: biome-format
         exclude: ^\.cruft\.json$ # inconsistent indentation with cruft - file never to be modified manually.
@@ -16,7 +16,7 @@ repos:
     hooks:
       - id: pyproject-fmt
   - repo: https://github.com/astral-sh/ruff-pre-commit
-    rev: v0.15.4
+    rev: v0.15.5
     hooks:
       - id: ruff-check
         args: [--fix, --exit-non-zero-on-fix]

pyproject.toml

@@ -14,18 +14,16 @@ maintainers = [
 authors = [
   { name = "Tim Treis" },
 ]
-requires-python = ">=3.10"
+requires-python = ">=3.12"
 classifiers = [
   "Programming Language :: Python :: 3 :: Only",
-  "Programming Language :: Python :: 3.10",
-  "Programming Language :: Python :: 3.11",
   "Programming Language :: Python :: 3.12",
   "Programming Language :: Python :: 3.13",
   "Programming Language :: Python :: 3.14",
 ]
 dependencies = [
   "anndata",
-  "holoviews",
+  "hv-anndata",
   # for debug logging (referenced from the issue template)
   "session-info2",
 ]
@@ -69,9 +67,9 @@ envs.docs.scripts.clean = "git clean -fdX -- {args:docs}"
 envs.hatch-test.features = [ "dev", "test" ]
 envs.hatch-test.matrix = [
   # Test the lowest and highest supported Python versions with normal deps
-  { deps = [ "stable" ], python = [ "3.10", "3.13" ] },
+  { deps = [ "stable" ], python = [ "3.14", "3.12" ] },
   # Test the newest supported Python version also with pre-release deps
-  { deps = [ "pre" ], python = [ "3.13" ] },
+  { deps = [ "pre" ], python = [ "3.14" ] },
 ]
 # If the matrix variable `deps` is set to "pre",
 # set the environment variable `UV_PRERELEASE` to "allow".

src/anndata_plot/__init__.py

@@ -1,16 +1,3 @@
-from importlib.metadata import version
-
-import holoviews as hv
-
 from . import pl, pp, tl
-from .pl.utils import AnnDataInterface
-
-__all__ = ["pl"]
-
-__version__ = version("anndata-plot")
-
-# register the AnnDataInterface with holoviews
-if AnnDataInterface.datatype not in hv.core.data.datatypes:
-    hv.core.data.datatypes.append(AnnDataInterface.datatype)
 
-hv.core.Interface.register(AnnDataInterface)
+__all__ = ["pl", "pp", "tl"]

tests/test_basic.py

@@ -3,10 +3,10 @@
 import anndata_plot
 
 
-def test_package_has_version():
-    assert anndata_plot.__version__ is not None
+def test_all() -> None:
+    assert set(dir(anndata_plot)) > {"pl", "pp", "tl"}
 
 
 @pytest.mark.skip(reason="This decorator should be removed when test passes.")
-def test_example():
+def test_example() -> None:
     assert 1 == 0  # This test is designed to fail.