chore: Upgrade Python requirements

[edx-requirements-bot]

Python requirements update. Please review the changelogs for the upgraded packages.

[edx-requirements-bot]

List of packages in the PR without any issue.

• cachetools changes from 7.2.1 to 7.2.3
• certifi changes from 2026.7.22 to 2026.10.18
• chardet changes from 7.6.0 to 7.7.0
• distlib changes from 0.4.3 to 0.4.4
• filelock changes from 4.1.1 to 4.2.2
• platformdirs changes from 4.13.0 to 4.13.4
• pluggy changes from 1.6.0 to 1.7.0
• pymongo changes from 4.18.3 to 4.19.0
• pyproject-api changes from 1.11.5 to 1.12.0
• python-discovery changes from 1.6.2 to 1.6.3
• ruff changes from 0.17.0 to 0.17.1
• soupsieve changes from 3.0.1 to 3.0.3
• tomlkit changes from 0.15.1 to 0.15.2
• tox changes from 4.65.3 to 4.67.1
• uv changes from 0.13.0 to 0.13.1
• virtualenv changes from 21.14.6 to 21.14.11
• wrapt changes from 2.5.0 to 2.5.1

[edx-requirements-bot]

These Packages need manual review..

• [MAJOR] pillow changes from 12.3.0 to 13.0.0