chore: Upgrade Python requirements

[edx-requirements-bot]

Python requirements update. Please review the changelogs for the upgraded packages.

Deleted obsolete pull_requests:
#449

[edx-requirements-bot]

List of packages in the PR without any issue.

• asgiref changes from 3.11.1 to 3.12.1
• bracex changes from 3.0 to 3.0.1
• build changes from 1.5.1 to 1.6.1
• cachetools changes from 7.1.4 to 7.2.0
• certifi changes from 2026.6.17 to 2026.7.22
• cffi changes from 2.1.0 to 2.1.1
• chardet changes from 7.4.3 to 7.6.0
• charset-normalizer changes from 3.4.9 to 3.5.1
• click changes from 8.4.2 to 8.5.0
• coverage[toml] changes from 7.15.1 to 7.16.1
• diff-cover changes from 10.3.0 to 10.5.1
• django changes from 5.2.16 to 5.2.17
• django-simple-history changes from 3.12.0 to 3.13.0
• djangorestframework changes from 3.17.1 to 3.18.1
• edx-django-utils changes from 8.0.1 to 8.0.2
• edx-drf-extensions changes from 10.6.0 to 10.9.0
• edx-lint changes from 6.1.0 to 6.2.0
• filelock changes from 3.29.7 to 3.32.7
• idna changes from 3.18 to 3.20
• imagesize changes from 2.0.0 to 2.0.1
• jaraco-functools changes from 4.5.0 to 4.6.0
• lxml[html-clean] changes from 6.1.1 to 6.1.3
• nh3 changes from 0.3.6 to 0.3.7
• openedx-atlas changes from 0.7.0 to 0.7.1
• packaging changes from 26.2 to 26.3
• pip changes from 26.1.2 to 26.2
• pip-tools changes from 7.5.3 to 7.6.1
• platformdirs changes from 4.10.0 to 4.11.11
• pydata-sphinx-theme changes from 0.16.1 to 0.20.0
• pygments changes from 2.20.0 to 2.21.0
• pyjwt[crypto] changes from 2.13.0 to 2.14.0
• pylint changes from 4.0.6 to 4.0.8
• pymongo changes from 4.17.0 to 4.18.1
• pyproject-api changes from 1.10.1 to 1.11.2
• pyproject-hooks changes from 1.2.0 to 1.3.3
• pytest-django changes from 4.12.0 to 4.14.0
• python-discovery changes from 1.4.4 to 1.6.1
• pytz changes from 2026.2 to 2026.3.post1
• ruff changes from 0.15.21 to 0.16.8
• simpleeval changes from 1.0.7 to 1.0.8
• soupsieve changes from 2.8.4 to 2.9.2
• sphinx-book-theme changes from 1.2.0 to 1.4.0
• sqlparse changes from 0.5.5 to 0.6.0
• stevedore changes from 5.9.0 to 5.9.1
• tomlkit changes from 0.15.0 to 0.15.1
• tox changes from 4.56.4 to 4.63.0
• urllib3 changes from 2.7.0 to 2.8.0
• virtualenv changes from 21.6.1 to 21.9.0
• wcmatch changes from 11.0 to 11.0.1
• wheel changes from 0.47.0 to 0.48.0

[edx-requirements-bot]

These Packages need manual review..

• [MAJOR] cryptography changes from 49.0.0 to 50.0.1
• [MAJOR] edx-organizations changes from 8.0.0 to 9.0.0
• [MAJOR] isort changes from 8.0.1 to 9.0.1
• [NEW] mypy-extensions (1.1.0) added to the requirements
• [MAJOR] python-slugify changes from 8.0.4 to 9.1.0
• [MAJOR] readme-renderer changes from 45.0 to 46.0
• [MAJOR] setuptools changes from 83.0.0 to 84.0.0
• [MAJOR] twine changes from 6.2.0 to 7.0.0
• [NEW] typing-extensions (4.16.0) added to the requirements