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obophenotype

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  1. human-phenotype-ontology human-phenotype-ontology Public

    Ontology for the description of human clinical features

    Makefile 379 72

  2. cell-ontology cell-ontology Public

    An ontology of cell types

    HTML 218 59

  3. uberon uberon Public

    An ontology of gross anatomy covering metazoa. Works in concert with https://github.com/obophenotype/cell-ontology

    Emacs Lisp 167 42

  4. upheno upheno Public

    The Unified Phenotype Ontology (uPheno) integrates multiple phenotype ontologies into a unified cross-species phenotype ontology.

    Jupyter Notebook 87 21

  5. bio-attribute-ontology bio-attribute-ontology Public

    source files for OBA (Ontology of Biological Attributes)

    Jupyter Notebook 32 14

  6. ncbitaxon ncbitaxon Public

    Build for NCBITaxon

    Python 31 7

Repositories

Showing 10 of 65 repositories
  • cell-ontology Public

    An ontology of cell types

    obophenotype/cell-ontology's past year of commit activity
    HTML 218 CC-BY-4.0 59 345 43 Updated Nov 2, 2026
  • upheno Public

    The Unified Phenotype Ontology (uPheno) integrates multiple phenotype ontologies into a unified cross-species phenotype ontology.

    obophenotype/upheno's past year of commit activity
    Jupyter Notebook 87 CC0-1.0 21 291 (5 issues need help) 24 Updated Nov 2, 2026
  • uberon Public

    An ontology of gross anatomy covering metazoa. Works in concert with https://github.com/obophenotype/cell-ontology

    obophenotype/uberon's past year of commit activity
    Emacs Lisp 167 42 272 42 Updated Nov 2, 2026
  • chebi_obo_slim Public

    A slimmed down version of CHEBI sufficient to cover 99% of the term needs across OBO ontologies

    obophenotype/chebi_obo_slim's past year of commit activity
    Makefile 5 4 4 2 Updated Nov 1, 2026
  • obophenotype/ascomycete-phenotype-ontology's past year of commit activity
    Shell 4 CC-BY-4.0 6 1 0 Updated Oct 30, 2026
  • bio-attribute-ontology Public

    source files for OBA (Ontology of Biological Attributes)

    obophenotype/bio-attribute-ontology's past year of commit activity
    Jupyter Notebook 32 CC0-1.0 14 94 3 Updated Oct 29, 2026
  • human-phenotype-ontology Public

    Ontology for the description of human clinical features

    obophenotype/human-phenotype-ontology's past year of commit activity
    Makefile 379 72 173 5 Updated Oct 27, 2026
  • ncbitaxon Public

    Build for NCBITaxon

    obophenotype/ncbitaxon's past year of commit activity
    Python 31 BSD-3-Clause 7 26 2 Updated Oct 26, 2026
  • hpo-translations Public

    This repo will contain the Human Phenotype Ontology language profiles

    obophenotype/hpo-translations's past year of commit activity
    Makefile 10 6 16 4 Updated Oct 26, 2026
  • pro_obo_slim Public

    A repo to generate a pro slim for the OBO phenotype organisation

    obophenotype/pro_obo_slim's past year of commit activity
    Makefile 1 1 0 0 Updated Oct 18, 2026