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chore(master): release 4.0.1 #1470

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2 changes: 1 addition & 1 deletion .release-please-manifest.json
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@@ -1,3 +1,3 @@
{
".": "4.0.0"
".": "4.0.1"
}
7 changes: 7 additions & 0 deletions CHANGELOG.md
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Expand Up @@ -17,6 +17,13 @@
* --missingDataAsZero no longer takes bases exceeding chromosome bounds as 0 values but rather purges the bins
* large scale values precision slightly altered with new backend (f32 vs f64)

## [4.0.1](https://github.com/deeptools/deepTools/compare/4.0.0...4.0.1) (2026-09-16)


### Documentation

* make sure changelog in docs reflects changelog in repo ([#1469](https://github.com/deeptools/deepTools/issues/1469)) ([51e50dd](https://github.com/deeptools/deepTools/commit/51e50dd0543a84392ebec09ac090f95da56577fc))

## 3.5.6
* minimal supported python version raised to 3.9 (numpy >= 2 support); NaN handling switched to np.nan
* drop conda usage in pypi/test/planemo CI in favor of pip installs; samtools now pulled from conda-forge/bioconda where still needed in CI
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2 changes: 1 addition & 1 deletion galaxy/wrapper/deepTools_macros.xml
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@@ -1,7 +1,7 @@
<macros>

<token name="@THREADS@">--numberOfProcessors "\${GALAXY_SLOTS:-4}"</token>
<token name="@TOOL_VERSION@">4.0.0</token> <!-- x-release-please-version -->
<token name="@TOOL_VERSION@">4.0.1</token> <!-- x-release-please-version -->
<token name="@GALAXY_VERSION@">23.2</token>
<xml name="requirements">
<requirements>
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2 changes: 1 addition & 1 deletion pyproject.toml
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Expand Up @@ -12,7 +12,7 @@ bindings = "pyo3"

[project]
name = "deeptools"
version = "4.0.0"
version = "4.0.1"
authors = [
{name="Vivek Bhardwaj"},
{name="Ward Deboutte"},
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