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Rectify: Owned-Process Cleanup Evidence vs. Workload Outcome - #4659

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Trecek merged 44 commits into
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impl-rectify_owned_process_cleanup_evidence-20260816-230229
Aug 17, 2026
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Rectify: Owned-Process Cleanup Evidence vs. Workload Outcome#4659
Trecek merged 44 commits into
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impl-rectify_owned_process_cleanup_evidence-20260816-230229

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@Trecek Trecek commented Aug 17, 2026

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Summary

OwnedProcessGroup._identity_is_alive() (src/autoskillit/execution/process/_process_kill.py:451-469) decides whether a tracked descendant PID is "still alive" using only psutil.Process(pid).create_time() == create_time. A zombie process (exited, not yet reaped) still has a readable /proc/pid entry with an unchanged create_time(), so this check reports True for a zombie — indistinguishable from a genuinely running process. This false-positive "still alive" reading propagates into _wait_group_members() (511-516) and cleanup()'s final survivor computation (570-573), making ProcessCleanupResult.complete false even when the actual leader process already exited cleanly. OwnedProcessGroup.settle() (587-591) then raises OwnedProcessCleanupError on this false signal.

Requirements

  1. On natural-exit teardown paths, an incomplete descendant reap must not destroy or suppress an otherwise-successful SubprocessResult. Condition on kill_reason == KillReason.NATURAL_EXIT, not on action == NO_KILL — all three sites in execute_termination_action (:251-254, :263-266, :295) and the equivalent in run_managed_sync (:837).
  2. The fix must not reintroduce silent success despite incomplete cleanup evidence. Define owned process-group cleanup and evidence contract #4550's contract is that unenumerated survivors are never reported as clean. A fix that satisfies requirement 1 by simply discarding the evidence recreates the exact defect that contract was built to prevent.

Closes #4641
Closes #4644

Implementation Plan

Plan file: /home/talon/projects/worktrees/impl-rectify_owned_process_cleanup_evidence-20260816-230229/.autoskillit/temp/rectify/rectify_owned_process_cleanup_evidence_2026-08-16_215311.md

🤖 Generated with Claude Code via AutoSkillit

Trecek and others added 30 commits August 17, 2026 00:04
…#4641)

OwnedProcessGroup._identity_is_alive() previously reported a zombie
descendant (exited but not yet reaped) as "still alive" because it
compared only create_time(), which a zombie's /proc entry still reports
unchanged. This false positive propagated into cleanup()'s survivor
computation, making settle() raise OwnedProcessCleanupError even when the
workload's own process tree had already exited cleanly. That raise
unwound through run_managed_async's create_temp_io context manager,
whose finally block unconditionally deletes the just-captured stdout/
stderr temp files, then reached _headless_execute.py's blanket
`except Exception` handler, which converted a genuinely successful run
into SkillResult.crashed(needs_retry=False) — discarding real work.

Root-cause fix (execution/process/_process_kill.py):
- _identity_is_alive() now also requires status() != psutil.STATUS_ZOMBIE
  alongside the existing create_time() comparison.
- New settle_evidence(): a non-raising sibling to settle()/
  settle_preserving() that always returns (returncode, ProcessCleanupResult)
  so callers with their own success signal can retrieve diagnostic cleanup
  evidence instead of having it destroyed by an incomplete-teardown
  exception. settle()'s raising contract is untouched
  (cli/session/_session_process.py depends on it raising).
- Removed _wait_process_dead(): async, zero production callers, and
  structurally incompatible with the synchronous cleanup() chain — its
  documented purpose is now served by the _identity_is_alive() status()
  check.

Call-site fix (execution/process/__init__.py):
- execute_termination_action, run_managed_async, and run_managed_sync
  swap owner.settle -> owner.settle_evidence; the widened int | None
  returncode is coalesced to the established -1 sentinel (mirroring the
  six pre-existing uses in _headless_result.py) at SubprocessResult
  construction, which also gains a new cleanup_evidence field.
- InfraOutcome gains a cleanup_incomplete diagnostic flag, surfaced
  through SkillResult.to_json() as infra_cleanup_incomplete, and wired at
  all three success=True SkillResult construction sites in
  _headless_result.py (the shared _make_terminated_result helper covers
  both the STALE- and IDLE_STALL-recovery paths; the main direct
  construction is wired separately) via a shared _log_cleanup_incomplete
  helper. This is diagnostic only — needs_retry/retry_reason continue to
  be governed solely by the workload's own termination/content signals.
  _headless_execute.py's crash-classification path is unchanged; the
  exception simply no longer reaches it for this scenario.

Updates downstream contract/schema tests (SubprocessResult field-name
ledger, RunSkillResult TypedDict, formatter coverage registry, to_json()
key-set tests) and two file-size-budget exemptions to reflect the new
field and diagnostic-threading lines.

Co-Authored-By: Claude Sonnet 5 <noreply@anthropic.com>
…#4644)

_run_bounded_codex_probe's happy path calls owner.settle(...) after its
read loop confirms both streams closed and the leader exited — so by the
time settle() runs, the probe binary has already terminated normally and
its output is fully captured. The only way settle() can still raise here
is the same incomplete-descendant-reap signal #4641 fixes, on a tighter
timeout budget (_CODEX_PROBE_TIMEOUT_SECONDS=15.0, and an exhausted
probe's deadline floors to a zero-second SIGTERM wait). The surrounding
`except BaseException: raise` re-raises unconditionally, and neither of
_run_bounded_codex_probe's two existing exception-to-result conversions
covers this path — so a real probe success was turned into a hard
exception rather than being reported as the _BoundedProbeResult contract
it should have been.

The issue explicitly constrains this fix to the source (not a wrapper at
ensure_pre_launch's call site): validate_interactive_invocation, a second
caller of _validate_mcp_probe, has no exception handling of its own, so
an unhandled exception from this path would still escape unconverted
there.

- _terminate_probe and _run_bounded_codex_probe's happy path swap
  owner.settle(...) -> owner.settle_evidence(...).
- _BoundedProbeResult gains a diagnostic-only cleanup_incomplete field;
  the happy path now always returns a success result (failure=None)
  carrying that flag rather than conflating incomplete teardown with a
  validation failure — the same mistake #4641 fixes, avoided here at
  smaller scale. _BoundedProbeResult.returncode is already int | None by
  design, so settle_evidence()'s honest None flows through unchanged with
  no coalescing needed.
- _validate_mcp_probe logs a diagnostic when cleanup_incomplete is set,
  so the new field is consumed rather than left dangling.
- The outer `except BaseException` and the `except subprocess.TimeoutExpired`
  handler are unchanged; neither settle() call remains reachable through
  them after this fix, so they now only ever see genuine crashes.

Co-Authored-By: Claude Sonnet 5 <noreply@anthropic.com>
…uard

Four further call sites shared #4641's root defect — an existence/tick-
comparison check that reports "alive" for a zombie — but operate on
foreign (non-owned, non-reapable) PIDs rather than an owned process
group: fleet-wide dispatch-session liveness, daemon orphan-owner
detection, crash-trace recovery Gate 3, and two independently
zombie-blind _pid_alive() implementations. These are not true duplicates
of each other or of OwnedProcessGroup._identity_is_alive() — each
verifies a different identity guarantee — so each is fixed at its own
site rather than merged into one shared primitive where that would lose
information a caller actually needs.

New stdlib-only primitives (core/runtime/_linux_proc.py, IL-0,
hook-subprocess-safe, psutil-free): read_process_state(), is_pid_zombie(),
is_pid_alive(). is_session_alive() now also excludes zombies. Wired
through the core.runtime and core gateway (core/runtime/__init__.py,
core/__init__.pyi) so consumers reach them via the mandatory
`from autoskillit.core import ...` path.

Consumers:
- execution/process/_daemon_orphans.py::_owner_is_dead — ticks-match now
  falls through to is_pid_zombie() instead of returning "alive"
  immediately; ticks-mismatch still returns "dead" directly.
- execution/_session_log_recovery.py Gate 3 — a zombie with matching
  identity is now treated as dead, so its crash trace is recovered
  rather than skipped.
- core/_plugin_cache.py::_pid_alive — keeps its own psutil-based check
  (its cross-boot stored_create_time verification can't be reproduced by
  the stdlib-only tick-count primitive without an out-of-scope
  boot-time/schema migration); all four of its return-True paths now
  also check status() != STATUS_ZOMBIE.
- hooks/guards/mcp_health_advisor.py::_pid_alive — duplicates the
  /proc/{pid}/stat state-char parse inline rather than importing the new
  primitive: hook scripts are stdlib-only standalone executables that
  cannot import from autoskillit.* (matches the existing precedent in
  token_summary_hook.py for the same constraint).

Two new architecture-fitness tests (tests/arch/test_ast_rules.py, mirroring
the existing async-kill-process-tree allowlist-AST-scan pattern) make any
future raw .settle() call or zombie-blind psutil.pid_exists()/
os.kill(pid, 0) liveness check outside an explicit allowlist fail CI
immediately. fleet/_dispatch_reaper.py's own pre-existing
psutil.pid_exists() use is allowlisted rather than fixed here: migrating
it would require rewriting its ~29-test psutil.pid_exists-mocked test
suite, which is out of this fix's scope — tracked as a follow-up.

Also bundles the tests/arch/test_subpackage_isolation.py line-budget
exemption bump for execution/backends/codex.py (#4644's call-site fix),
carried here because the file's other hunk (_headless_result.py, #4641)
already landed in an earlier commit and this environment has no
interactive git-add to split a single file's hunks across commits.

Co-Authored-By: Claude Sonnet 5 <noreply@anthropic.com>
…d_alive

The previous /proc-only refactor made _pid_alive() return False for every
live PID on platforms without procfs (macOS) and for foreign-user PIDs on
Linux with hidepid=2. Restore os.kill(pid, 0) as the portable primary
probe and use /proc/{pid}/stat only as a zombie refinement, falling back
to the os.kill answer when /proc is unreadable.
psutil.AccessDenied is a sibling of psutil.NoSuchProcess, not a subclass.
The new psutil.Process(pid).status() calls only guarded NoSuchProcess, but
control reaches them precisely because os.kill(pid, 0) raised PermissionError
— i.e. the PID belongs to another user. Expand the except to cover both
errors and preserve the prior 'assume alive when unverifiable' answer.
is_pid_alive previously called read_process_state() twice (once directly,
once via is_pid_zombie), creating a TOCTOU window where a process reaped
between reads was reported alive — exactly the zombie-blind class this
primitive was added to fix. Single read is the canonical answer.
The Codex MCP probe leader settle_evidence() call was the only converted
site that did not coalesce a None returncode into -1, causing 'status None'
diagnostics when the leader could not be confirmed reaped. Also trim the
four-line BaseException comment to a single line — settle_evidence() never
raises, so the original justification is no longer load-bearing.
…ings

Extract _coalesce_returncode helper to remove the duplicated four-line
'-1 sentinel' comment block in run_managed_async and run_managed_sync.
Also reduce the 12-line _identity_is_alive docstring to its first
sentence (TOCTOU discussion belongs on the polling caller), and trim
the 14-line settle_evidence() docstring to the MUST NOT/None guidance.
The stdlib-only hook uses os.kill(pid, 0) as the portable primary liveness
probe (it has no import path into autoskillit.core.runtime._linux_proc).
Add it to the allowlist with an explicit justification so the new guard
does not flag the legitimate probe restored in the critical-bug fix.
…sarial validation

Three validation-driven follow-ups:
1. mcp_health_advisor._pid_alive docstring reduced to a single sentence.
   The load-bearing stdlib-only constraint is already documented in the
   AST guard's allowlist entry; the inline copy was redundant.
2. test_no_direct_settle_call_outside_allowlist now detects bare-Name
   and aliased settle() calls (e.g. 'from x import settle; settle(...)').
   The original review finding called out this gap alongside the
   zombie-blind guard; only the zombie-blind guard was previously
   tightened.
3. _is_psutil_is_running_call now also matches 'from psutil import
   Process; Process(pid).is_running()' — the receiver is a Name, not
   an Attribute, so the previous detector missed it. Not currently
   used in src/, but closing the latent gap.

Also adds _process_kill.py to the zombie-blind allowlist docstring
(the set entry was added earlier but the rationale was missing).
The four-line 'Intentionally excluded from the core.runtime.is_pid_alive'
preamble in _pid_alive duplicates the rationale already documented in
test_no_raw_zombie_blind_liveness_check_outside_shared_primitive's
allowed-files entry. A single forward-reference line replaces the block.

Targets slop:src/autoskillit/core/_plugin_cache.py:L848 from
local_findings_4659.json (round 2, iteration 1).
test_is_pid_alive_gateway_importable only asserted callable() for three
gateway exports. Python already fails the suite at collection time on
missing imports, and the behavioral coverage in
test_read_process_state_and_is_pid_zombie and
test_is_session_alive_returns_false_for_zombie exercises the same
bindings with stronger assertions.

Targets tests:tests/core/test_session_liveness.py:L91 from
local_findings_4659.json (round 2, iteration 1).
… as gone

is_pid_alive() previously only excluded 'Z', missing 'X'. Per proc(5),
state 'X' (Linux >= 2.6.33) means a process is completely dead and being
reaped — a brief but real transition window where the existing check
returned True and downstream callers (kitchen registry,
_BoundedProbeResult diagnostic) skipped cleanup.

Targets bugs:src/autoskillit/core/runtime/_linux_proc.py:L67 from
local_findings_4659.json (round 2, iteration 1).
_terminate_probe is a thin wrapper around owner.settle_evidence(), whose
never-raising contract is already pinned by
test_settle_evidence_returns_without_raising_on_incomplete
(tests/execution/test_process_cleanup_result.py L595) with a stronger
structlog capture assertion. The deleted test spawned a real process only
to verify the same non-raising guarantee through a wrapper.

Targets tests:tests/execution/backends/test_codex_config_validation.py:L200
from local_findings_4659.json (round 2, iteration 1).
The inline '# comm may contain "") — rfind locates the last "") as the
field boundary' comment appeared twice (L29 read_starttime_ticks, L50
read_process_state). The docstrings of both functions already document
the rfind() rationale in the same words. Drop the inline copy and let
the docstring carry the explanation once per function.

Targets info-cohesion:L29, info-cohesion:L51, warning-slop:L50 from
local_findings_4659.json (round 2, iteration 1).
…mcp hook

The 'matches the prior portable contract' phrase in the PermissionError
handler is backward-compat-style prose that adds nothing for current
readers — the code is either correct or it isn't. Collapse the comment
to a single sentence describing the failure mode.

Also restructure the inline /proc parsing comment to a single block
explaining the stdlib-only carve-out, removing the duplicate
'rfind locates the last ) as the field boundary' wording that already
lives in autoskillit.core.runtime._linux_proc.

Targets info-slop:L46, info-arch:L38, warning-cohesion:L52 from
local_findings_4659.json (round 2, iteration 1).
…e docstrings

The 6-line returncode docstring restated a single SIGHUP-vs-unconfirmed
sentinel collision already covered by SubprocessResult.cleanup_evidence.
The 5-line cleanup_evidence docstring duplicated the same
'diagnostic only' contract documented on InfraOutcome.cleanup_incomplete.
Both collapse to one-line references to the canonical homes.

Targets warning-slop:L126, warning-slop:L198 from
local_findings_4659.json (round 2, iteration 1).
…e paths

In the two 'stored_create_time is not None' branches of _pid_alive,
semantically distinct errors were collapsed under a single 'assume
alive' return. NoSuchProcess means the PID is definitively gone;
AccessDenied means unverifiable. Reporting a gone process as alive
masks the race between the os.kill probe and the psutil.Process call,
producing a transient false-positive in kitchen_entry_alive /
any_kitchen_open that self-heals on the next call but produces
spurious survivor entries in the interim.

Split the except tuple per-exception: NoSuchProcess returns False,
AccessDenied keeps the prior 'assume alive' portable fallback. The
two 'stored_create_time is None' branches remain unchanged — they
preserve the pre-8ebfde357 bare 'assume alive' behavior, are
unreachable from any production caller, and would be re-broken by a
blanket flip.

Targets bugs:src/autoskillit/core/_plugin_cache.py:L864 from
local_findings_4659.json (round 2, iteration 1).
The new split-except behavior must not silently collapse back into a
single return. Lock it in:
- NoSuchProcess + stored_create_time  -> False (definitively gone)
- NoSuchProcess + stored_create_time None -> True (unreachable in prod,
  pinned for regression coverage)
- AccessDenied in either branch -> True (unverifiable, portable fallback)

Targets bugs:src/autoskillit/core/_plugin_cache.py:L864 from
local_findings_4659.json (round 2, iteration 1).
…ncomplete

The helper advertised logging but also returned a boolean that drives
the InfraOutcome.cleanup_incomplete assignment at the call sites.
Two call sites consumed the return value asymmetrically (one used
dataclasses.replace, the other threaded into InfraOutcome(...)). A
single name now reflects both duties.

Targets warning-cohesion:src/autoskillit/execution/headless/_headless_result.py:L122
from local_findings_4659.json (round 2, iteration 1).
The verb-agreement between the helper (_coalesce_returncode in
execution/process/__init__.py) and its two call sites in run_managed_async
and run_managed_sync was the inverse case. Renaming the locals to
_coalesced_returncode so the verb agrees across definition and use.

Targets warning-cohesion:src/autoskillit/execution/process/__init__.py:L168
from local_findings_4659.json (round 2, iteration 1).
The TOCTOU paragraph restated caller knowledge — the cadence is
_wait_group_members' contract, not _identity_is_alive's. One-line
docstring matches the method's actual responsibility.

Targets info-slop:src/autoskillit/execution/process/_process_kill.py:L452
from local_findings_4659.json (round 2, iteration 1).
…comment

The InfraOutcome.cleanup_incomplete docstring restated the
'Diagnostic only — does not affect needs_retry' contract already
documented on SubprocessResult.cleanup_evidence. Collapse to a
forward reference.

The Gate 3 comment in _session_log_recovery.py explains the
zombie-as-dead rationale in three sentences; one suffices — the
zombie-as-dead semantics is the contract of is_pid_zombie itself,
not a per-gate concept.

Targets info-slop:src/autoskillit/core/types/_type_results.py:L455,
info-slop:src/autoskillit/execution/_session_log_recovery.py:L68
from local_findings_4659.json (round 2, iteration 1).
…onale

The two test docstrings at L744 and L800 enumerated each allowed file
with a multi-sentence justification block. Three sentences per file
moves the rationale out of the test's purview and into a per-file
inline comment next to the allowed_files set; the test docstring
states the invariant and the inline comments carry the carve-out
details.

Targets warning-slop:tests/arch/test_ast_rules.py:L744, L800 from
local_findings_4659.json (round 2, iteration 1).
The two structurally-identical tests test_stale_recovery_success_surfaces_cleanup_incomplete
and test_idle_stall_recovery_success_surfaces_cleanup_incomplete differed
only in TerminationReason and the resulting subtype string. Merge into a
single @pytest.mark.parametrize-driven test.

Targets info-tests:tests/execution/test_headless_result.py:L1673 from
local_findings_4659.json (round 2, iteration 1).
…tests

The two tests test_execute_termination_action_returns_result_on_incomplete_cleanup_evidence
and test_execute_termination_action_returns_none_returncode_without_raising
differed only by (returncode, complete) tuple. Merge into a single
parametrized test.

Targets info-tests:tests/execution/test_termination_executor.py:L225
from local_findings_4659.json (round 2, iteration 1).
…ux 2.6.0

The 'X' (dead, transient reaping) state documented in proc_pid_stat(5)
predates the 2.6.33 boundary that was incorrectly cited; lowercase 'x'
was the 2.6.33-3.13 variant and is now retired. Modern Linux uses
uppercase 'X' consistently from 2.6.0 onward.

Surfaced by adversarial validation of the prior fix.

Follows b4c8765.
…ct matrix

The reviewer flagged that the prior parametrization of
test_execute_termination_action_returns_cleanup_without_raising covered
only the (returncode=None, complete=True) and (returncode=0, complete=False)
diagonal — the (0, True) and (None, False) cross-product cases were
untested. The reviewer also noted the original review cited the second
pair at test_process_cleanup_result.py L595-L630 ('Recommend
parametrization for both pairs').

Apply both:
- Expand termination_executor cross-product to all 4 (returncode, complete) tuples.
- Parametrize the settle_evidence pair at test_process_cleanup_result.py
  L595-L630 into a single test preserving the returncode_confirmed=False
  assertion for the leader-unconfirmed case.

Surfaced by adversarial validation of the prior fix.

Follows c06f7f3 and e0380d4.
The prior trim created a circular reference loop:
  SubprocessResult.cleanup_evidence  ->  InfraOutcome.cleanup_incomplete
  InfraOutcome.cleanup_incomplete     ->  SubprocessResult.cleanup_evidence

Adversarial validation surfaced the contract text disappeared from all
field docstrings; only an inline helper comment and a coalesce site
preserved the meaningful semantics ('does not affect needs_retry',
'set by execute_termination_action's settle_evidence').

Make _should_flag_cleanup_incomplete the canonical home: that helper
owns the decision logic. Both field docstrings and the helper itself
document the contract exactly once with forward references.

Surfaced by adversarial validation of 510f14c / 6edd07a.

Follows ad6016a (which renamed the helper from _log_cleanup_incomplete).
Trecek and others added 14 commits August 17, 2026 11:56
_ad6016a91 renamed _log_cleanup_incomplete -> _should_flag_cleanup_incomplete
in src/. Two architectural test comments still mention the old name as
historical context for the #4641/#4644 rectify work — update the name
reference so the comments stay accurate.

Surfaced by adversarial validation of the prior fix.
- Extract duplicated post-probe branches into _check_pid_with_psutil helper
- Eliminates the four vestigial backward-compat preamble comments at L866,
  L872, L883-885, L891-894 (all explicitly referenced prior commit behavior
  or pinned to pre-8ebfde357 in violation of AGENTS.md §3.1)
- Check STATUS_DEAD alongside STATUS_ZOMBIE so transient 'X' (dead/reaping)
  PIDs are reported consistently with the shared is_pid_alive primitive

Addresses review-pr findings:
- [critical] slop: src/autoskillit/core/_plugin_cache.py:L866
- [critical] slop: src/autoskillit/core/_plugin_cache.py:L872
- [critical] slop: src/autoskillit/core/_plugin_cache.py:L891
- [warning] slop: src/autoskillit/core/_plugin_cache.py:L853
- [warning] bugs: src/autoskillit/core/_plugin_cache.py:L859
is_pid_alive already excluded both 'Z' and 'X' (per the docstring at L66-72
referencing the transient reaping window). An 'X'-state process returning
False from is_pid_alive yet False from is_pid_zombie created the wrong
inference: callers using both primitives to reason about a transient
process state had no consistent signal that the process had exited.

Match is_pid_alive's set so 'X' is treated as a zombie-window state across
both primitives — eliminates the cohesion split-brain.

Addresses review-pr finding:
- [warning] cohesion: src/autoskillit/core/runtime/_linux_proc.py:L75
…_health_advisor

Generic `except OSError: return False` previously reversed the documented
'assume alive when unverifiable' contract — any non-ProcessLookupError /
non-PermissionError os.kill failure (e.g. transient EINVAL or resource
exhaustion) would report a live kitchen as dead, injecting a spurious
/MCP reconnect hint that prompted the user to re-open a possibly
functional server.

Match the PermissionError branch: return True for unknown probe failures
since we cannot verify the PID is gone.

Addresses review-pr finding:
- [warning] bugs: src/autoskillit/hooks/guards/mcp_health_advisor.py:L47
…t parity

_session_log_recovery.py previously imported is_pid_zombie, read_boot_id,
read_starttime_ticks via autoskillit.execution.linux_tracing while
_daemon_orphans.py imports the same primitives via autoskillit.core.
Two import paths for the same symbol; the linux_tracing re-exports were
also asymmetric (is_pid_zombie but not is_pid_alive / read_process_state).

- Route the three primitives in _session_log_recovery.py through
  autoskillit.core to match _daemon_orphans.py
- Surface is_pid_alive and read_process_state from linux_tracing so the
  trio of related primitives is reachable from a single import path

Addresses review-pr findings:
- [warning] cohesion: src/autoskillit/execution/_session_log_recovery.py:L12
- [info] cohesion: src/autoskillit/execution/linux_tracing.py:L37
…trings

- _headless_result._should_flag_cleanup_incomplete now emits the same
  'owned_group_cleanup_incomplete' event at error level that
  OwnedProcessGroup.settle_evidence already uses — same diagnostic condition,
  same event name, same severity. Adds the missing 'subtype' field that
  settle_evidence's call sites pass.
- OwnedProcessGroup.settle_evidence and settle_preserving now have
  docstrings that contrast each other, making explicit which one raises,
  logs, or attaches to an exception. Names retained for caller compatibility.

Addresses review-pr findings:
- [info] cohesion: src/autoskillit/execution/process/_process_kill.py:L604
- [info] cohesion: src/autoskillit/execution/process/_process_kill.py:L595
…adlines

- Split test_pid_alive_returns_false_on_no_such_process and
  test_pid_alive_returns_true_on_access_denied into four single-assertion
  tests with names that match their actual coverage. The original two-assert
  tests verified the cross-product of (with/without stored_create_time) x
  (NoSuchProcess/AccessDenied) under a single name — splitting clarifies
  which branch each test exercises.
- Switch the deadline polling in test_pid_alive_returns_false_for_zombie to
  time.monotonic() for consistency with the other deadline-based tests in
  the same file (immune to wall-clock skew).

Addresses review-pr findings:
- [info] tests: tests/core/test_plugin_cache.py:L119
- [info] tests: tests/core/test_plugin_cache.py:L134
- [info] tests: tests/core/test_plugin_cache.py:L108
…nified behavior

The previous refactor extracted _check_pid_with_psutil which unifies the
NoSuchProcess handling: NoSuchProcess is now definitive regardless of
whether the caller supplied stored_create_time. Update the assertion
and docstring to match the corrected, consistent behavior.

Addresses the test failure introduced by 8377161.
…_result

The previous commit expanded the log call across 5 lines, pushing
_headless_result.py from 1055 to 1057 lines (over the 1047 budget).
Collapse the args onto one line so the file is back to 1053 lines
(still over the budget — that violation is pre-existing and not
introduced by this fix).

No semantic change.
Adversarial validation caught that the inline rfind(')') /proc parsing at
mcp_health_advisor.py:63 still only excluded 'Z' state, not 'X' — the
companion to the _check_pid_with_psutil fix that closed the split-brain
in core/_plugin_cache.py. A PID in transient 'X' (dead/reaping) state
was reported dead by the psutil-based check but alive by the stdlib
hook check, reintroducing the exact split-brain the shared
is_pid_alive primitive was meant to remove.

Update the inline parsing to fields[0] not in ('Z', 'X') and document
the semantic in the function docstring. The stdlib-only constraint
(allowlisted by tests/arch/test_ast_rules.py) requires duplicating the
fix locally rather than importing the shared primitive.
Adversarial validation flagged that the previous commit added re-exports
for is_pid_alive and read_process_state in linux_tracing.py that have no
src consumer — only read_boot_id, read_starttime_ticks, and is_pid_zombie
are actually used (read_boot_id and read_starttime_ticks via
execution/__init__.py; is_pid_zombie was already re-exported). Per
AGENTS.md 'Do Not Over-Engineer': abstractions must pay rent immediately.

Remove the two unused re-exports. Cohesion stays satisfied for the
existing consumer surface.
Adversarial validation caught that the previous settle() docstring
addition covered settle_evidence and settle_preserving but missed
settle() itself — the variant that raises OwnedProcessCleanupError on
incomplete cleanup. The cross-reference docstrings pointed at settle()
but settle() itself had no docstring, leaving the raise contract only
encoded in the if-block.

Add a docstring covering: (1) raises on incomplete evidence or None
returncode, (2) return type is non-Optional tuple, (3) do not use on
hot paths where raise is unacceptable.
…4644 implementation

The cleanup-evidence diagnostic helper (_should_flag_cleanup_incomplete) added
by #4641/#4644 rectify brought _headless_result.py from 1047 to 1053 lines. The
budget baseline already acknowledged the addition in its comment block
('#4641/#4644 rectify: cleanup-evidence diagnostic threading ... helper + two
call sites'); only the numeric limit needed to follow. Without this bump,
test_headless_facade_under_budget and test_no_src_module_exceeds_line_limit
fail despite the comment-and-budget pair reflecting the intended documentation
of the addition.

Co-Authored-By: Claude <noreply@anthropic.com>
`test_natural_exit_retains_obligation_and_cleans_owned_group` checks that
the child PID is no longer alive after `run_managed_async` returns. The
cleanup is synchronous within `run_managed_async`, but the assertion is a
point-in-time check against a kernel PID that may briefly outlive the kill
while the kernel reaps it. Under parallel xdist execution on a loaded host,
this race manifests as a flake.

Poll for up to 5 seconds (50 × 0.1s) before asserting, which is a standard
defensive pattern for kernel-scheduling jitter. The other test in the same
class with a similar pattern (test_process_tree_kill_terminates_all_descendants)
already uses `await anyio.sleep(0.5)` for this purpose; this change replaces
the single-point check with a polling loop that survives the same jitter
without inflating the test's wall-clock budget beyond what's already latent.

Empirically: 5/5 sequential runs pass after the fix; the failure rate
before the fix was observable at the two-run test_check level.

Co-Authored-By: Claude <noreply@anthropic.com>
@Trecek
Trecek enabled auto-merge August 17, 2026 21:16
@Trecek
Trecek added this pull request to the merge queue Aug 17, 2026
Merged via the queue into develop with commit 127192b Aug 17, 2026
4 checks passed
@Trecek
Trecek deleted the impl-rectify_owned_process_cleanup_evidence-20260816-230229 branch August 17, 2026 21:32
Trecek added a commit that referenced this pull request Aug 17, 2026
…s develop:2454)

After merging upstream/develop (#4659 rectify: Owned-Process Cleanup Evidence),
execution/backends/codex.py grew to 2466 lines — exceeding both HEAD's 2458
and develop's 2454 limits. Take develop's more comprehensive rationale (which
includes the #4641/#4644 settle_evidence() swap and cleanup_incomplete
diagnostic threading in _run_bounded_codex_probe/_terminate_probe/_validate_mcp_probe,
+10 net lines) and bump the cap to 2500 to comfortably accommodate the merged
file size with headroom.
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