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Make sure transferred_to_hpc gets set #11

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Merged
ssjunnebo merged 2 commits into from
Jan 19, 2026
Merged

Make sure transferred_to_hpc gets set #11

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fbec3c8
Bugfix: transferred_to_hpc was not being set after sync finished
ssjunnebo Jan 15, 2026
b641622
Bump version
ssjunnebo Jan 15, 2026
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5 changes: 3 additions & 2 deletions dataflow_transfer/dataflow_transfer.py
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Expand Up @@ -22,8 +22,9 @@ def process_run(run_dir, sequencer, config):
run.confirm_run_type()

## Transfer already completed. Do nothing.
if run.final_sync_successful:
# Removing the exit code file lets the run retry transfer
if run.final_sync_successful and run.has_status("transferred_to_hpc"):
# Check transfer success both in statusdb and via exit code file
# To restart transfer, remove the exit code file
logger.info(f"Transfer of {run_dir} is finished. No action needed.")
return

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2 changes: 1 addition & 1 deletion pyproject.toml
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Expand Up @@ -20,7 +20,7 @@ ignore = [

[project]
name = "dataflow_transfer"
version = "1.0.3"
version = "1.0.4"
description = "Script for transferring sequencing data from sequencers to storage"
authors = [
{ name = "Sara Sjunnebo", email = "sara.sjunnebo@scilifelab.se" },
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