NLM Division of Intramural Research
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TPMCalculator
TPMCalculator PublicTPMCalculator quantifies mRNA abundance directly from the alignments by parsing BAM files
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Showing 10 of 14 repositories
- Magic2 Public
Acedb object oriented database engine and AceView/MAGIC RNA_seq pipeline, NCBI/NLM/NIH
NLM-DIR/Magic2’s past year of commit activity - vadr Public
Viral Annotation DefineR: classification and annotation of viral sequences based on RefSeq annotation
NLM-DIR/vadr’s past year of commit activity - ribovore Public
NLM-DIR/ribovore’s past year of commit activity - TPMCalculator Public
TPMCalculator quantifies mRNA abundance directly from the alignments by parsing BAM files
NLM-DIR/TPMCalculator’s past year of commit activity - BAMscale Public
BAMscale is a one-step tool for either 1) quantifying and normalizing the coverage of peaks or 2) generated scaled BigWig files for easy visualization of commonly used DNA-seq capture based methods.
NLM-DIR/BAMscale’s past year of commit activity - histonedb Public
NLM-DIR/histonedb’s past year of commit activity - pm4ngs-chipseq Public
NLM-DIR/pm4ngs-chipseq’s past year of commit activity
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