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Make copy of BatchPositionList file so that time stamped versions are created as records in case the file is corrupted during acquisition #751

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Make copy of BatchPositionList file so that time stamped versions are created as records in case the file is corrupted during acquisition #751

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7 changes: 7 additions & 0 deletions src/murfey/client/contexts/tomo_metadata.py
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Original file line number Diff line number Diff line change
@@ -1,4 +1,6 @@
import logging
import shutil
from datetime import datetime
from pathlib import Path
from typing import Optional

Expand Down Expand Up @@ -208,6 +210,11 @@ def post_transfer(

elif transferred_file.name == "BatchPositionsList.xml":
logger.info("Tomography session batch positions list found")
shutil.copy(
transferred_file,
transferred_file.parent
/ f"{transferred_file.stem}-{datetime.now().strftime('%Y-%m-%d-%H-%M-%S')}{transferred_file.suffix}",
)
dcg_tag = ensure_dcg_exists(
collection_type="tomo",
metadata_source=metadata_source,
Expand Down
4 changes: 0 additions & 4 deletions src/murfey/client/rsync.py
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Original file line number Diff line number Diff line change
Expand Up @@ -133,10 +133,6 @@ def from_rsyncer(cls, rsyncer: RSyncer, **kwargs):
"notify": rsyncer._notify,
}
kwarguments_from_rsyncer.update(kwargs)
assert isinstance(kwarguments_from_rsyncer["local"], bool)
assert isinstance(kwarguments_from_rsyncer["do_transfer"], bool)
assert isinstance(kwarguments_from_rsyncer["remove_files"], bool)
assert isinstance(kwarguments_from_rsyncer["notify"], bool)
return cls(
rsyncer._basepath,
rsyncer._basepath_remote,
Expand Down