Skip to content
@CDCgov

Centers for Disease Control and Prevention

CDC's collaborative software projects to protect America from health, safety, and security threats, both foreign and in the U.S.

CDCGov Organization

This is CDC's GitHub organization for collaborating on open source projects. More information on CDC's open collaboration projects is available at openCDC.

Check out our Open Source Practices and please suggest any ideas for improvement by sending a pull request.

Check out a portal of all the projects hosted in the CDCGov domain. (thanks to Tony Boyles)

If you would like to create a new project, please complete this form logging in with your CDC credentials.

If you would like to join the CDCGov organization, or would like to suggest some others to join, please drop an issue into the template repo.

Pinned Loading

  1. cdcgov.github.io cdcgov.github.io Public

    Portal site for all CDCgov projects, https://cdcgov.github.io

    HTML 23 32

  2. template template Public template

    Template repository with rules, practices, and privacy, license, records notices to help people use the CDCgov GitHub organization.

    40 49

Repositories

Showing 10 of 515 repositories
  • nowcastNHSN Public

    Nowcasting for the NHSN hospitalisation signals

    CDCgov/nowcastNHSN’s past year of commit activity
    1 Apache-2.0 0 7 1 Updated Jan 7, 2026
  • PyRenew Public

    Python package for multi-signal Bayesian renewal modeling with JAX and NumPyro.

    CDCgov/PyRenew’s past year of commit activity
    Python 23 Apache-2.0 9 53 5 Updated Jan 7, 2026
  • CDCgov/nccdphp-drh-mmria’s past year of commit activity
    C# 2 GPL-3.0 0 0 1 Updated Jan 7, 2026
  • cfa-cloudops Public
    CDCgov/cfa-cloudops’s past year of commit activity
    Python 2 Apache-2.0 1 10 3 Updated Jan 7, 2026
  • pyrenew-hew Public

    Models and infrastructure for forecasting respiratory disease hospitalizations using wastewater data with PyRenew.

    CDCgov/pyrenew-hew’s past year of commit activity
    Python 16 Apache-2.0 3 59 4 Updated Jan 7, 2026
  • phoenix Public

    đŸ”„đŸŠđŸ”„PHoeNIx: a platform agnostic pipeline for healthcare-associated and antimicrobial resistant pathogens

    CDCgov/phoenix’s past year of commit activity
    Python 89 Apache-2.0 35 11 0 Updated Jan 7, 2026
  • prime-fhir-converter Public

    The CDC’s Pandemic-Ready Interoperability Modernization Effort (PRIME) Java based FHIR conversion library

    CDCgov/prime-fhir-converter’s past year of commit activity
    Kotlin 14 Apache-2.0 5 2 1 Updated Jan 7, 2026
  • NEDSS-DataReporting Public

    Data Near Real Time Reporting micro services for Modernized NBS System

    CDCgov/NEDSS-DataReporting’s past year of commit activity
    TSQL 3 Apache-2.0 7 0 8 Updated Jan 7, 2026
  • CDCgov/NEDSS-Modernization’s past year of commit activity
    Java 24 6 0 10 Updated Jan 7, 2026
  • prime-reportstream Public

    ReportStream is a public intermediary tool for delivery of data between different parts of the healthcare ecosystem.

    CDCgov/prime-reportstream’s past year of commit activity
    CSS 82 CC0-1.0 44 1,210 102 Updated Jan 7, 2026