Hi,
First of all, thanks for a great tool!
I'm wondering if there's a way to search only forward frames in a translated search. In the mmseqs easy-taxonomy help there's:
--forward-frames STR Comma-separated list of frames on the forward strand to be extracted [1,2,3]
--reverse-frames STR Comma-separated list of frames on the reverse strand to be extracted [1,2,3]
so the default seems to be all three frames on both strands. Is there a way to disable extraction of orfs on the reverse frame? I tried setting --reverse-frames '' but the log for extractorfs still has --reverse-frames 1,2,3 so that doesn't seem to work.