From a5161f8956b6f0fb514046cb9b12f0138c59e675 Mon Sep 17 00:00:00 2001 From: luisabender Date: Thu, 13 Aug 2026 15:47:10 +0200 Subject: [PATCH 1/3] added package versions --- src/metrics/spearman_corr/config.vsh.yaml | 15 ++++++++------- 1 file changed, 8 insertions(+), 7 deletions(-) diff --git a/src/metrics/spearman_corr/config.vsh.yaml b/src/metrics/spearman_corr/config.vsh.yaml index ad51136..914f883 100644 --- a/src/metrics/spearman_corr/config.vsh.yaml +++ b/src/metrics/spearman_corr/config.vsh.yaml @@ -45,13 +45,14 @@ engines: - git # pip needs it to install openproblems core from git+https - type: python packages: - - anndata~=0.10.0 - - scanpy~=1.10.0 - - scipy - - pandas - - pyyaml - - requests - - jsonschema + - anndata~=0.10.9 + - scanpy~=1.10.4 + - numpy~=2.4.6 + - pandas~=3.0.5 + - scipy~=1.17.1 + - pyyaml~=6.0.3 + - requests~=2.34.2 + - jsonschema~=4.26.0 github: - "openproblems-bio/core#subdirectory=packages/python/openproblems" From a5cd33d9ce2cfa3b4867125e787397f83fb2b9b1 Mon Sep 17 00:00:00 2001 From: luisabender Date: Thu, 13 Aug 2026 15:51:40 +0200 Subject: [PATCH 2/3] changelog --- CHANGELOG.md | 1 + 1 file changed, 1 insertion(+) diff --git a/CHANGELOG.md b/CHANGELOG.md index fb3d361..2f68754 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -15,6 +15,7 @@ ## MINOR CHANGES +* Added package versions to the spearman config file. ## BUGFIXES From 6345b12fbe3c4899d727cc76fbb8769f7e508cfe Mon Sep 17 00:00:00 2001 From: luisabender Date: Thu, 13 Aug 2026 15:52:26 +0200 Subject: [PATCH 3/3] changelog 2 --- CHANGELOG.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/CHANGELOG.md b/CHANGELOG.md index 2f68754..0023291 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -15,7 +15,7 @@ ## MINOR CHANGES -* Added package versions to the spearman config file. +* Added package versions to the spearman config file. (PR #7) ## BUGFIXES