From 1b66b0de5e4abe4f56e83f4854e054b08291c5d1 Mon Sep 17 00:00:00 2001 From: LouisK92 Date: Fri, 20 Feb 2026 12:23:14 +0100 Subject: [PATCH] Change default ct annotation method to tacco --- scripts/run_benchmark/run_full_local.sh | 2 +- scripts/run_benchmark/run_full_seqeracloud.sh | 2 +- scripts/run_benchmark/run_test_local.sh | 2 +- scripts/run_benchmark/run_test_seqeracloud.sh | 2 +- 4 files changed, 4 insertions(+), 4 deletions(-) diff --git a/scripts/run_benchmark/run_full_local.sh b/scripts/run_benchmark/run_full_local.sh index 1464a6df..588c2ab8 100755 --- a/scripts/run_benchmark/run_full_local.sh +++ b/scripts/run_benchmark/run_full_local.sh @@ -28,7 +28,7 @@ default_methods: - basic_qc_filter - alpha_shapes - normalize_by_volume - - ssam + - tacco - no_correction segmentation_methods: - custom_segmentation diff --git a/scripts/run_benchmark/run_full_seqeracloud.sh b/scripts/run_benchmark/run_full_seqeracloud.sh index d006f7e0..1662714a 100755 --- a/scripts/run_benchmark/run_full_seqeracloud.sh +++ b/scripts/run_benchmark/run_full_seqeracloud.sh @@ -20,7 +20,7 @@ default_methods: - basic_qc_filter - alpha_shapes - normalize_by_volume - - ssam + - tacco - no_correction segmentation_methods: - custom_segmentation diff --git a/scripts/run_benchmark/run_test_local.sh b/scripts/run_benchmark/run_test_local.sh index 686326b9..db693124 100755 --- a/scripts/run_benchmark/run_test_local.sh +++ b/scripts/run_benchmark/run_test_local.sh @@ -23,7 +23,7 @@ default_methods: - basic_qc_filter - alpha_shapes - normalize_by_volume - - ssam + - tacco - no_correction segmentation_methods: - custom_segmentation diff --git a/scripts/run_benchmark/run_test_seqeracloud.sh b/scripts/run_benchmark/run_test_seqeracloud.sh index 39ab8c5e..89ca8d4d 100755 --- a/scripts/run_benchmark/run_test_seqeracloud.sh +++ b/scripts/run_benchmark/run_test_seqeracloud.sh @@ -19,7 +19,7 @@ default_methods: - basic_qc_filter - alpha_shapes - normalize_by_volume - - ssam + - tacco - no_correction segmentation_methods: - custom_segmentation