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KazeemHamzatKazeemHamzat
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Update SMap
Update SMap
1 parent 040757f commit 59dc5ab

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Lines changed: 25 additions & 25 deletions

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‎ConceptMap/TestStructureMap.json‎

Lines changed: 18 additions & 18 deletions
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@@ -111,7 +111,7 @@
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"context": "source",
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"min": 1,
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"max": "1",
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"element": "Gene symbol",
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"element": "geneRep",
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"variable": "a"
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}
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],
@@ -159,7 +159,7 @@
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{
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"context": "queried",
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"max": "1",
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"element": "Bioinformatic analysis workflow",
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"element": "bioinformaticAnalysisWorkflow",
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"variable": "a"
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}
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],
@@ -183,7 +183,7 @@
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"transform": "evaluate",
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"parameter": [
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{
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"valueString": "'http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genomic-study-analysis-protocol-performed'"
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"valueString": "http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genomic-study-analysis-protocol-performed"
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}
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]
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},
@@ -202,7 +202,7 @@
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"context": "queried",
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"min": 1,
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"max": "1",
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"element": "Reference genome",
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"element": "referenceGenome",
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"variable": "a"
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}
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],
@@ -241,7 +241,7 @@
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"source": [
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{
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"context": "queried",
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"element": "Variant identification",
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"element": "variantIdentification",
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"variable": "a"
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}
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],
@@ -328,7 +328,7 @@
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"source": [
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{
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"context": "queried",
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"element": "Structured variant",
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"element": "structuredVariant",
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"max": "1",
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"variable": "a"
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}
@@ -376,12 +376,12 @@
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"source": [
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{
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"context": "queried",
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"element": "Transcript reference sequence",
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"element": "transcriptReferenceSequence",
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"variable": "a"
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},
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{
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"context": "queried",
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"element": "Best transcript candidate",
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"element": "bestTranscriptCandidate",
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"variable": "b"
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}
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],
@@ -437,7 +437,7 @@
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"transform": "evaluate",
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"parameter": [
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{
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"valueString": "'http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/workflow-relatedArtifactComponent'"
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"valueString": "http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/workflow-relatedArtifactComponent"
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}
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]
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},
@@ -459,12 +459,12 @@
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"source": [
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{
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"context": "queried",
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"element": "DNA region name",
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"element": "DNARegionName",
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"variable": "a"
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},
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{
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"context": "queried",
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"element": "Distance from splicing site",
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"element": "distanceFromSplicingSite",
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"variable": "b"
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}
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],
@@ -531,7 +531,7 @@
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"source": [
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{
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"context": "queried",
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"element": "DNA change",
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"element": "DNAChange",
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"variable": "a"
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}
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],
@@ -578,7 +578,7 @@
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"source": [
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{
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"context": "queried",
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"element": "Amino acid change",
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"element": "AminoAcidChange",
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"variable": "a"
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}
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],
@@ -959,7 +959,7 @@
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"transform": "evaluate",
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"parameter": [
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{
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"valueString": "'http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/workflow-relatedArtifactComponent'"
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"valueString": "http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/workflow-relatedArtifactComponent"
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}
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]
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},
@@ -1165,7 +1165,7 @@
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"transform": "evaluate",
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"parameter": [
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{
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"valueString": "'http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/workflow-relatedArtifactComponent'"
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"valueString": "http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/workflow-relatedArtifactComponent"
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}
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]
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},
@@ -1580,7 +1580,7 @@
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"transform": "evaluate",
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"parameter": [
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{
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"valueString": "'http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/workflow-relatedArtifactComponent'"
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"valueString": "http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/workflow-relatedArtifactComponent"
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}
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]
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},
@@ -1997,7 +1997,7 @@
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"transform": "evaluate",
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"parameter": [
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{
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"valueString": "'http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/workflow-relatedArtifactComponent'"
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"valueString": "http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/workflow-relatedArtifactComponent"
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}
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]
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},
@@ -2114,7 +2114,7 @@
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"transform": "evaluate",
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"parameter": [
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{
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"valueString": "'http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/workflow-relatedArtifactComponent'"
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"valueString": "http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/workflow-relatedArtifactComponent"
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}
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]
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},

‎StructureMap/StructureMap-PharmacogeneticTestResult-Genomics.json‎

Lines changed: 7 additions & 7 deletions
Original file line numberDiff line numberDiff line change
@@ -183,7 +183,7 @@
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"transform": "evaluate",
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"parameter": [
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{
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"valueString": "'http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genomic-study-analysis-protocol-performed'"
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"valueString": "http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genomic-study-analysis-protocol-performed"
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}
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]
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},
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"transform": "evaluate",
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"parameter": [
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{
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"valueString": "'http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/workflow-relatedArtifactComponent'"
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"valueString": "http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/workflow-relatedArtifactComponent"
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}
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]
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},
@@ -959,7 +959,7 @@
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"transform": "evaluate",
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"parameter": [
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{
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"valueString": "'http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/workflow-relatedArtifactComponent'"
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"valueString": "http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/workflow-relatedArtifactComponent"
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}
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]
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},
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"transform": "evaluate",
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"parameter": [
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{
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"valueString": "'http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/workflow-relatedArtifactComponent'"
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"valueString": "http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/workflow-relatedArtifactComponent"
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}
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]
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},
@@ -1580,7 +1580,7 @@
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"transform": "evaluate",
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"parameter": [
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{
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"valueString": "'http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/workflow-relatedArtifactComponent'"
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"valueString": "http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/workflow-relatedArtifactComponent"
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}
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]
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},
@@ -1997,7 +1997,7 @@
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"transform": "evaluate",
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"parameter": [
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{
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"valueString": "'http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/workflow-relatedArtifactComponent'"
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"valueString": "http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/workflow-relatedArtifactComponent"
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}
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]
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},
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"transform": "evaluate",
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"parameter": [
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{
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"valueString": "'http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/workflow-relatedArtifactComponent'"
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"valueString": "http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/workflow-relatedArtifactComponent"
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}
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]
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},

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