diff --git a/README.md b/README.md
index f1be277..e6e1b5a 100644
--- a/README.md
+++ b/README.md
@@ -63,6 +63,20 @@ semble search "save_pretrained" ./my-project
 semble search "save model to disk" ./my-project --top-k 10
 ​```
 
+If you anticipate doing more than one search, use `semble index` to create an index.
+
+​```bash
+semble index ./my-project -o my_index
+​```
+
+You can then reuse this index later on:
+
+​```bash
+semble search "save_pretrained" --index my_index
+​```
+
+An index is not automatically updated, so if the code changes significantly, reindex. If you notice stale results while resolving searches to files, reindex.
+
 Use `--content docs` to search documentation and prose, `--content config` for config files (yaml, toml, etc.), or `--content all` to search code, docs, and config:
 
 ​```bash
@@ -77,17 +91,20 @@ Use `semble find-related` to discover code similar to a known location (pass `fi
 semble find-related src/auth.py 42 ./my-project
 ​```
 
+Like search, `find-related` also accepts an `--index` argument.
+
 `path` defaults to the current directory when omitted; git URLs are accepted.
 
 If `semble` is not on `$PATH`, use `uvx --from "semble[mcp]" semble` in its place.
 
 ### Workflow
 
-1. Start with `semble search` to find relevant chunks.
-2. Use `--content docs` for documentation, `--content config` for config files, or `--content all` for everything.
-3. Inspect full files only when the returned chunk is not enough context.
-4. Optionally use `semble find-related` with a promising result's `file_path` and `line` to discover related implementations.
-5. Use grep only when you need exhaustive literal matches or quick confirmation of an exact string.
+1. Index the repo using `semble index -o cached_index`.
+2. Start with `semble search` to find relevant chunks. Pass the index to achieve results faster.
+3. Use `--content docs` for documentation, `--content config` for config files, or `--content all` for everything.
+4. Inspect full files only when the returned chunk does not give enough context.
+5. Optionally use `semble find-related` with a promising result's `file_path` and `line` to discover related implementations.
+6. Use grep only when you need exhaustive literal matches or quick confirmation of an exact string.
 ```
 
 </details>
@@ -318,6 +335,20 @@ semble search "save_pretrained" ./my-project
 semble search "save model to disk" ./my-project --top-k 10
 ​```
 
+If you anticipate doing more than one search, use `semble index` to create an index.
+
+​```bash
+semble index ./my-project -o my_index
+​```
+
+You can then reuse this index later on:
+
+​```bash
+semble search "save_pretrained" --index my_index
+​```
+
+An index is not automatically updated, so if the code changes significantly, reindex. If you notice stale results while resolving searches to files, reindex.
+
 Use `--content docs` to search documentation and prose, `--content config` for config files (yaml, toml, etc.), or `--content all` to search code, docs, and config:
 
 ​```bash
@@ -332,17 +363,20 @@ Use `semble find-related` to discover code similar to a known location (pass `fi
 semble find-related src/auth.py 42 ./my-project
 ​```
 
+Like search, `find-related` also accepts an `--index` argument.
+
 `path` defaults to the current directory when omitted; git URLs are accepted.
 
 If `semble` is not on `$PATH`, use `uvx --from "semble[mcp]" semble` in its place.
 
-## Workflow
+### Workflow
 
-1. Start with `semble search` to find relevant chunks.
-2. Use `--content docs` for documentation, `--content config` for config files, or `--content all` for everything.
-3. Inspect full files only when the returned chunk is not enough context.
-4. Optionally use `semble find-related` with a promising result's `file_path` and `line` to discover related implementations.
-5. Use grep only when you need exhaustive literal matches or quick confirmation of an exact string.
+1. Index the repo using `semble index -o cached_index`.
+2. Start with `semble search` to find relevant chunks. Pass the index to achieve results faster.
+3. Use `--content docs` for documentation, `--content config` for config files, or `--content all` for everything.
+4. Inspect full files only when the returned chunk does not give enough context.
+5. Optionally use `semble find-related` with a promising result's `file_path` and `line` to discover related implementations.
+6. Use grep only when you need exhaustive literal matches or quick confirmation of an exact string.
 ```
 
 ### Sub-agent setup
@@ -365,8 +399,14 @@ If semble is not on `$PATH`, prefix the command with `uvx --from "semble[mcp]"`.
 Semble also ships as a standalone CLI. This is useful in scripts or anywhere you want search results without an MCP session.
 
 ```bash
+# Index a local repository
+semble index ./my-project -o my-index
+
 # Search a local repo
 semble search "authentication flow" ./my-project
+# Or with index (significantly faster)
+# the index flag applies to all commands below.
+semble search "authentication flow" --index my-index
 
 # Search for a symbol or identifier
 semble search "save_pretrained" ./my-project
diff --git a/benchmarks/baselines/ablations.py b/benchmarks/baselines/ablations.py
index 63ca099..7f91b67 100644
--- a/benchmarks/baselines/ablations.py
+++ b/benchmarks/baselines/ablations.py
@@ -5,7 +5,6 @@
 from dataclasses import asdict
 
 import numpy as np
-from model2vec import StaticModel
 
 from benchmarks.data import (
     RepoSpec,
@@ -38,8 +37,6 @@
 def _bench(
     repo_tasks: dict[str, list[Task]],
     specs: dict[str, RepoSpec],
-    model: StaticModel,
-    modes: list[str],
     *,
     verbose: bool = False,
 ) -> list[RepoResult]:
@@ -62,7 +59,7 @@ def _bench(
             print(f"\n--- {repo} ---", file=sys.stderr)
 
         started = time.perf_counter()
-        index = SembleIndex.from_path(spec.benchmark_dir, model=model)
+        index = SembleIndex.from_path(spec.benchmark_dir)
         index_ms = (time.perf_counter() - started) * 1000
 
         for mode, (alpha, rerank) in sorted(_MODE_PARAMS.items()):
@@ -98,30 +95,26 @@ def _bench(
 def _parse_args() -> argparse.Namespace:
     parser = argparse.ArgumentParser(description="semble ablation benchmarks.")
     add_filter_args(parser, verbose=True)
-    parser.add_argument(
-        "--mode", action="append", default=[], choices=sorted(_MODE_PARAMS), help="Mode(s) to evaluate (default: all)."
-    )
     return parser.parse_args()
 
 
 def main() -> None:
     """Run the semble ablation benchmarks."""
     args = _parse_args()
-    modes = args.mode or sorted(_MODE_PARAMS)
 
     repo_specs, tasks = load_filtered_tasks(args.repo or None, args.language or None)
 
     print("Loading model...", file=sys.stderr)
     started = time.perf_counter()
-    model = StaticModel.from_pretrained(_DEFAULT_MODEL_NAME)
     print(f"Loaded in {(time.perf_counter() - started) * 1000:.0f}ms", file=sys.stderr)
     print(file=sys.stderr)
 
-    results = _bench(grouped_tasks(tasks), repo_specs, model, modes, verbose=args.verbose)
+    results = _bench(grouped_tasks(tasks), repo_specs, verbose=args.verbose)
 
     if not results:
         return
 
+    modes = sorted(_MODE_PARAMS)
     print(file=sys.stderr)
     for mode in modes:
         mode_results = [r for r in results if r.mode == mode]
diff --git a/benchmarks/baselines/coderankembed.py b/benchmarks/baselines/coderankembed.py
index 1d7fd8a..c93da09 100644
--- a/benchmarks/baselines/coderankembed.py
+++ b/benchmarks/baselines/coderankembed.py
@@ -63,7 +63,6 @@ class RepoResult:
 def _evaluate(
     index: SembleIndex,
     tasks: list[Task],
-    mode: str,
     *,
     verbose: bool = False,
 ) -> tuple[float, float, list[float], dict[str, float]]:
@@ -78,7 +77,7 @@ def _evaluate(
         results: list[SearchResult] = []
         for _ in range(_LATENCY_RUNS):
             started = time.perf_counter()
-            results = index.search(task.query, top_k=_TOP_K, mode=mode)
+            results = index.search(task.query, top_k=_TOP_K)
             query_latencies.append((time.perf_counter() - started) * 1000)
         latencies.append(float(np.median(query_latencies)))
 
@@ -176,12 +175,12 @@ def _bench(
             print(f"\n--- {repo} ---", file=sys.stderr)
 
         started = time.perf_counter()
-        index = SembleIndex.from_path(spec.benchmark_dir, model=model)
+        index = SembleIndex.from_path(spec.benchmark_dir)
         index_ms = (time.perf_counter() - started) * 1000
 
         repo_results: list[RepoResult] = []
         for mode in modes:
-            ndcg5, ndcg10, latencies, by_category = _evaluate(index, tasks, mode, verbose=verbose)
+            ndcg5, ndcg10, latencies, by_category = _evaluate(index, tasks, verbose=verbose)
             p50, p90 = np.percentile(latencies, [50, 90]).tolist()
             result = RepoResult(
                 repo=repo,
diff --git a/benchmarks/results/semble-ablations-757197f3967d.json b/benchmarks/results/semble-ablations-64fa8cf54011.json
similarity index 66%
rename from benchmarks/results/semble-ablations-757197f3967d.json
rename to benchmarks/results/semble-ablations-64fa8cf54011.json
index 23c1c34..8541f96 100644
--- a/benchmarks/results/semble-ablations-757197f3967d.json
+++ b/benchmarks/results/semble-ablations-64fa8cf54011.json
@@ -4,38 +4,38 @@
   "by_mode": {
     "semble-auto": {
       "avg_ndcg10": 0.8529,
-      "avg_p50_ms": 1.8,
+      "avg_p50_ms": 1.6,
       "avg_tokens": 3195.6
     },
     "semble-balanced": {
       "avg_ndcg10": 0.853,
-      "avg_p50_ms": 1.8,
+      "avg_p50_ms": 1.6,
       "avg_tokens": 3189.1
     },
     "semble-bm25": {
       "avg_ndcg10": 0.8301,
-      "avg_p50_ms": 1.8,
-      "avg_tokens": 3334.5
+      "avg_p50_ms": 1.6,
+      "avg_tokens": 3334.7
     },
     "semble-semantic": {
       "avg_ndcg10": 0.8205,
-      "avg_p50_ms": 1.7,
-      "avg_tokens": 2965.7
+      "avg_p50_ms": 1.5,
+      "avg_tokens": 2966.0
     },
     "unranked-auto": {
-      "avg_ndcg10": 0.7193,
-      "avg_p50_ms": 0.5,
+      "avg_ndcg10": 0.719,
+      "avg_p50_ms": 0.4,
       "avg_tokens": 3254.4
     },
     "unranked-balanced": {
-      "avg_ndcg10": 0.7168,
+      "avg_ndcg10": 0.7164,
       "avg_p50_ms": 0.4,
       "avg_tokens": 3254.9
     },
     "unranked-bm25": {
       "avg_ndcg10": 0.6794,
       "avg_p50_ms": 0.4,
-      "avg_tokens": 3327.0
+      "avg_tokens": 3327.1
     },
     "unranked-semantic": {
       "avg_ndcg10": 0.6561,
@@ -52,11 +52,11 @@
       "tokens": 2987,
       "ndcg5": 0.9002968226739917,
       "ndcg10": 0.9099681428548552,
-      "p50_ms": 2.154458503355272,
-      "p90_ms": 27.831842011073604,
-      "p95_ms": 27.99414199544117,
-      "p99_ms": 29.34276200132444,
-      "index_ms": 5211.168916983297,
+      "p50_ms": 1.8491874798201025,
+      "p90_ms": 26.797133596846834,
+      "p95_ms": 27.873033029027283,
+      "p99_ms": 29.114873814396557,
+      "index_ms": 5205.662791966461,
       "by_category": {
         "architecture": 1.0,
         "semantic": 0.9132908571398067,
@@ -71,11 +71,11 @@
       "tokens": 2991,
       "ndcg5": 0.8968306505776613,
       "ndcg10": 0.9065019707585249,
-      "p50_ms": 1.9143334939144552,
-      "p90_ms": 27.666058292379603,
-      "p95_ms": 27.89192675263621,
-      "p99_ms": 28.906051755184308,
-      "index_ms": 5211.168916983297,
+      "p50_ms": 1.8273124878760427,
+      "p90_ms": 26.511037192540247,
+      "p95_ms": 28.072531291400082,
+      "p99_ms": 28.950806232751347,
+      "index_ms": 5205.662791966461,
       "by_category": {
         "architecture": 1.0,
         "semantic": 0.9132908571398067,
@@ -90,11 +90,11 @@
       "tokens": 3181,
       "ndcg5": 0.7524823322000669,
       "ndcg10": 0.770292691555468,
-      "p50_ms": 1.9260414992459118,
-      "p90_ms": 27.83808751264587,
-      "p95_ms": 28.43110835092375,
-      "p99_ms": 29.156655285332818,
-      "index_ms": 5211.168916983297,
+      "p50_ms": 1.6513954906258732,
+      "p90_ms": 26.377888076240197,
+      "p95_ms": 27.066920828656293,
+      "p99_ms": 27.666117752087303,
+      "index_ms": 5205.662791966461,
       "by_category": {
         "architecture": 0.8154648767857288,
         "semantic": 0.7516616051691933,
@@ -109,11 +109,11 @@
       "tokens": 2800,
       "ndcg5": 0.8652370238946989,
       "ndcg10": 0.8652370238946989,
-      "p50_ms": 1.6508544940734282,
-      "p90_ms": 27.362216397887096,
-      "p95_ms": 27.563716952863615,
-      "p99_ms": 29.035076190193646,
-      "index_ms": 5211.168916983297,
+      "p50_ms": 1.5014999662525952,
+      "p90_ms": 26.808799983700737,
+      "p95_ms": 27.2638562542852,
+      "p99_ms": 28.06917121517472,
+      "index_ms": 5205.662791966461,
       "by_category": {
         "architecture": 1.0,
         "semantic": 0.8536493651929319,
@@ -128,11 +128,11 @@
       "tokens": 3182,
       "ndcg5": 0.799814948079167,
       "ndcg10": 0.8272966276154318,
-      "p50_ms": 1.0752705129561946,
-      "p90_ms": 1.2209663924295455,
-      "p95_ms": 1.25137114955578,
-      "p99_ms": 1.2677742243977264,
-      "index_ms": 5211.168916983297,
+      "p50_ms": 0.8875835337676108,
+      "p90_ms": 0.9227922768332064,
+      "p95_ms": 0.924829492578283,
+      "p99_ms": 0.9272994671482593,
+      "index_ms": 5205.662791966461,
       "by_category": {
         "architecture": 0.8154648767857288,
         "semantic": 0.8372530407752768,
@@ -147,11 +147,11 @@
       "tokens": 3179,
       "ndcg5": 0.8191575884408941,
       "ndcg10": 0.8288289086217576,
-      "p50_ms": 1.0297915141563863,
-      "p90_ms": 1.149766120943241,
-      "p95_ms": 1.2305336640565656,
-      "p99_ms": 1.247506721119862,
-      "index_ms": 5211.168916983297,
+      "p50_ms": 0.8772089786361903,
+      "p90_ms": 0.9313743968959898,
+      "p95_ms": 0.9335354552604258,
+      "p99_ms": 0.9378743008710444,
+      "index_ms": 5205.662791966461,
       "by_category": {
         "architecture": 0.8154648767857288,
         "semantic": 0.8372530407752768,
@@ -166,11 +166,11 @@
       "tokens": 3310,
       "ndcg5": 0.673061118212001,
       "ndcg10": 0.7089622267455828,
-      "p50_ms": 1.0590419988147914,
-      "p90_ms": 1.1398165923310444,
-      "p95_ms": 1.1948285711696371,
-      "p99_ms": 1.2010993267176673,
-      "index_ms": 5211.168916983297,
+      "p50_ms": 0.8803754753898829,
+      "p90_ms": 0.9246336354408413,
+      "p95_ms": 0.9394413355039433,
+      "p99_ms": 0.963888262049295,
+      "index_ms": 5205.662791966461,
       "by_category": {
         "architecture": 1.0,
         "semantic": 0.6794738396154784,
@@ -185,11 +185,11 @@
       "tokens": 2918,
       "ndcg5": 0.774814948079167,
       "ndcg10": 0.8000855677417903,
-      "p50_ms": 0.9675835171947256,
-      "p90_ms": 1.1777496983995661,
-      "p95_ms": 1.2244625002495013,
-      "p99_ms": 1.2447925002197735,
-      "index_ms": 5211.168916983297,
+      "p50_ms": 0.8836460183374584,
+      "p90_ms": 0.9341826662421227,
+      "p95_ms": 0.9349976171506569,
+      "p99_ms": 0.945099545060657,
+      "index_ms": 5205.662791966461,
       "by_category": {
         "architecture": 1.0,
         "semantic": 0.7667807569890537,
@@ -204,11 +204,11 @@
       "tokens": 3731,
       "ndcg5": 0.7420624189796883,
       "ndcg10": 0.7619528590399762,
-      "p50_ms": 6.826562981586903,
-      "p90_ms": 13.415866577997809,
-      "p95_ms": 17.175413941731684,
-      "p99_ms": 25.26178279309532,
-      "index_ms": 232.50404201098718,
+      "p50_ms": 6.332625023787841,
+      "p90_ms": 12.647713080514226,
+      "p95_ms": 15.879524999763824,
+      "p99_ms": 24.45840502856298,
+      "index_ms": 238.65254200063646,
       "by_category": {
         "architecture": 0.5896918237758785,
         "semantic": 0.8193732041280086
@@ -222,11 +222,11 @@
       "tokens": 3731,
       "ndcg5": 0.7420624189796883,
       "ndcg10": 0.7619528590399762,
-      "p50_ms": 6.250916499993764,
-      "p90_ms": 13.34238341369201,
-      "p95_ms": 16.960346432460945,
-      "p99_ms": 24.790435692120795,
-      "index_ms": 232.50404201098718,
+      "p50_ms": 6.168375024572015,
+      "p90_ms": 13.384503603447232,
+      "p95_ms": 16.39045239135158,
+      "p99_ms": 25.013190460740574,
+      "index_ms": 238.65254200063646,
       "by_category": {
         "architecture": 0.5896918237758785,
         "semantic": 0.8193732041280086
@@ -240,11 +240,11 @@
       "tokens": 3784,
       "ndcg5": 0.7170624189796883,
       "ndcg10": 0.733729085646355,
-      "p50_ms": 6.451249995734543,
-      "p90_ms": 13.554386890609754,
-      "p95_ms": 17.054075002670295,
-      "p99_ms": 25.348714990541325,
-      "index_ms": 232.50404201098718,
+      "p50_ms": 6.190125015564263,
+      "p90_ms": 13.073236908530822,
+      "p95_ms": 16.682291679899215,
+      "p99_ms": 24.265824732719906,
+      "index_ms": 238.65254200063646,
       "by_category": {
         "architecture": 0.49640912954215805,
         "semantic": 0.8128357376810872
@@ -258,11 +258,11 @@
       "tokens": 3503,
       "ndcg5": 0.7517311170762105,
       "ndcg10": 0.7626514889171188,
-      "p50_ms": 6.339166502584703,
-      "p90_ms": 13.243199704447767,
-      "p95_ms": 16.894541654619395,
-      "p99_ms": 24.909374717972227,
-      "index_ms": 232.50404201098718,
+      "p50_ms": 6.158646516269073,
+      "p90_ms": 12.89741669897922,
+      "p95_ms": 16.328671170049354,
+      "p99_ms": 23.77863422327208,
+      "index_ms": 238.65254200063646,
       "by_category": {
         "architecture": 0.6809270736081082,
         "semantic": 0.7898929606867888
@@ -276,11 +276,11 @@
       "tokens": 3668,
       "ndcg5": 0.8315464876785729,
       "ndcg10": 0.8493568470339741,
-      "p50_ms": 0.2720000047702342,
-      "p90_ms": 0.27734200994018465,
-      "p95_ms": 0.279310745827388,
-      "p99_ms": 0.28529574716230854,
-      "index_ms": 232.50404201098718,
+      "p50_ms": 0.2677504962775856,
+      "p90_ms": 0.2750461164396256,
+      "p95_ms": 0.28184554539620876,
+      "p99_ms": 0.2820362988859415,
+      "index_ms": 238.65254200063646,
       "by_category": {
         "architecture": 0.6712414374216045,
         "semantic": 0.9087286502380972
@@ -294,11 +294,11 @@
       "tokens": 3668,
       "ndcg5": 0.8315464876785729,
       "ndcg10": 0.8493568470339741,
-      "p50_ms": 0.2703540085349232,
-      "p90_ms": 0.2801666792947799,
-      "p95_ms": 0.2842274043359794,
-      "p99_ms": 0.2889454786782153,
-      "index_ms": 232.50404201098718,
+      "p50_ms": 0.2730419801082462,
+      "p90_ms": 0.2985836123116315,
+      "p95_ms": 0.3174038487486541,
+      "p99_ms": 0.3241807292215526,
+      "index_ms": 238.65254200063646,
       "by_category": {
         "architecture": 0.6712414374216045,
         "semantic": 0.9087286502380972
@@ -312,11 +312,11 @@
       "tokens": 3687,
       "ndcg5": 0.8215338279036697,
       "ndcg10": 0.8215338279036697,
-      "p50_ms": 0.26402050571050495,
-      "p90_ms": 0.27804171841125935,
-      "p95_ms": 0.2800211514113471,
-      "p99_ms": 0.2873042452847585,
-      "index_ms": 232.50404201098718,
+      "p50_ms": 0.2820210356730968,
+      "p90_ms": 0.30756223131902516,
+      "p95_ms": 0.3177437261911109,
+      "p99_ms": 0.32144877652172,
+      "index_ms": 238.65254200063646,
       "by_category": {
         "architecture": 0.6,
         "semantic": 0.895378437204893
@@ -330,11 +330,11 @@
       "tokens": 3573,
       "ndcg5": 0.8446394630357187,
       "ndcg10": 0.8446394630357187,
-      "p50_ms": 0.2759999770205468,
-      "p90_ms": 0.30899549601599574,
-      "p95_ms": 0.314080948010087,
-      "p99_ms": 0.3349497867748141,
-      "index_ms": 232.50404201098718,
+      "p50_ms": 0.28464547358453274,
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diff --git a/benchmarks/results/semble-hybrid-1529eb900e03.json b/benchmarks/results/semble-hybrid-64fa8cf54011.json
similarity index 54%
rename from benchmarks/results/semble-hybrid-1529eb900e03.json
rename to benchmarks/results/semble-hybrid-64fa8cf54011.json
index 20cb95b..e9e263d 100644
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       "chunks": 559,
       "tokens": 6561,
       "ndcg5": 0.8696694218045175,
       "ndcg10": 0.8696694218045175,
-      "p50_ms": 0.7299589924514294,
-      "p90_ms": 6.346333998953923,
-      "p95_ms": 7.230854689260011,
-      "p99_ms": 8.084203741163947,
-      "index_ms": 262.6065000076778,
+      "p50_ms": 0.703292025718838,
+      "p90_ms": 6.275550404097884,
+      "p95_ms": 7.0966409868560705,
+      "p99_ms": 8.019861017819494,
+      "index_ms": 255.50687505165115,
       "by_category": {
         "architecture": 0.8214210289682636,
         "semantic": 0.8758471076530654,
@@ -1002,16 +1002,16 @@
     {
       "repo": "plug",
       "language": "elixir",
-      "mode": "hybrid",
-      "chunks": 255,
-      "tokens": 5475,
+      "mode": "auto",
+      "chunks": 280,
+      "tokens": 5453,
       "ndcg5": 0.9077324383928644,
       "ndcg10": 0.9077324383928644,
-      "p50_ms": 0.6260005029616877,
-      "p90_ms": 5.081016698386521,
-      "p95_ms": 5.531496141338722,
-      "p99_ms": 6.425699220271779,
-      "index_ms": 135.74308299575932,
+      "p50_ms": 0.5957914690952748,
+      "p90_ms": 4.975942010059954,
+      "p95_ms": 5.41783573862631,
+      "p99_ms": 6.2146007228875515,
+      "index_ms": 144.76424996973947,
       "by_category": {
         "architecture": 1.0,
         "semantic": 0.868189197704092,
@@ -1021,16 +1021,16 @@
     {
       "repo": "pydantic",
       "language": "python",
-      "mode": "hybrid",
+      "mode": "auto",
       "chunks": 1533,
       "tokens": 3259,
       "ndcg5": 0.7779397805814576,
       "ndcg10": 0.7990792723017901,
-      "p50_ms": 0.8225625060731545,
-      "p90_ms": 8.732558402698489,
-      "p95_ms": 9.606254797836304,
-      "p99_ms": 12.635550959676033,
-      "index_ms": 637.3374579998199,
+      "p50_ms": 0.8387715206481516,
+      "p90_ms": 9.12412969628349,
+      "p95_ms": 9.751593103283088,
+      "p99_ms": 12.972885019262316,
+      "index_ms": 638.1215409492142,
       "by_category": {
         "architecture": 0.7133473647659958,
         "semantic": 0.7946530173877968,
@@ -1040,16 +1040,16 @@
     {
       "repo": "rack",
       "language": "ruby",
-      "mode": "hybrid",
+      "mode": "auto",
       "chunks": 256,
       "tokens": 2716,
       "ndcg5": 0.9200892395358251,
       "ndcg10": 0.9200892395358251,
-      "p50_ms": 0.5817909914185293,
-      "p90_ms": 5.105554398323877,
-      "p95_ms": 6.7818875497323425,
-      "p99_ms": 8.287011109350711,
-      "index_ms": 120.10412498784717,
+      "p50_ms": 0.5772290169261396,
+      "p90_ms": 5.3691295091994125,
+      "p95_ms": 7.105498242890459,
+      "p99_ms": 8.67043326492421,
+      "index_ms": 117.37654102034867,
       "by_category": {
         "architecture": 1.0,
         "semantic": 0.8561606311644849,
@@ -1059,35 +1059,35 @@
     {
       "repo": "rails",
       "language": "ruby",
-      "mode": "hybrid",
-      "chunks": 480,
-      "tokens": 2488,
-      "ndcg5": 0.8424426241273885,
-      "ndcg10": 0.8526617440068127,
-      "p50_ms": 0.8136250035022385,
-      "p90_ms": 5.78059999388643,
-      "p95_ms": 7.92522289630142,
-      "p99_ms": 8.310510981973493,
-      "index_ms": 200.3997919964604,
+      "mode": "auto",
+      "chunks": 498,
+      "tokens": 2508,
+      "ndcg5": 0.8445678978178954,
+      "ndcg10": 0.8445678978178954,
+      "p50_ms": 0.8368125127162784,
+      "p90_ms": 6.538095325231556,
+      "p95_ms": 8.946779780671932,
+      "p99_ms": 9.077055964735337,
+      "index_ms": 223.2084579882212,
       "by_category": {
-        "architecture": 0.8407779776854644,
+        "architecture": 0.845500808108813,
         "semantic": 0.8596832229722856,
-        "symbol": 0.8671126300402693
+        "symbol": 0.8160170306431477
       }
     },
     {
       "repo": "redis",
       "language": "c",
-      "mode": "hybrid",
-      "chunks": 6367,
+      "mode": "auto",
+      "chunks": 6358,
       "tokens": 3434,
       "ndcg5": 0.9158764682653967,
       "ndcg10": 0.9158764682653967,
-      "p50_ms": 1.6168544971151277,
-      "p90_ms": 1.839174993801862,
-      "p95_ms": 1.8652833452506459,
-      "p99_ms": 2.050090265256585,
-      "index_ms": 3394.3092499976046,
+      "p50_ms": 1.0316870175302029,
+      "p90_ms": 1.124629465630278,
+      "p95_ms": 1.1758628475945443,
+      "p99_ms": 1.2073397391941398,
+      "index_ms": 3384.953958040569,
       "by_category": {
         "architecture": 0.9430676558073394,
         "semantic": 0.8886852807234542
@@ -1096,16 +1096,16 @@
     {
       "repo": "redux",
       "language": "javascript",
-      "mode": "hybrid",
+      "mode": "auto",
       "chunks": 53,
       "tokens": 2834,
       "ndcg5": 0.8863147192765458,
       "ndcg10": 0.9137963988128106,
-      "p50_ms": 0.5073330030427314,
-      "p90_ms": 3.3224618920939974,
-      "p95_ms": 3.455506242607955,
-      "p99_ms": 5.334701251849761,
-      "index_ms": 27.28395898884628,
+      "p50_ms": 0.6011460209265351,
+      "p90_ms": 3.4300118975806986,
+      "p95_ms": 3.7916791334282625,
+      "p99_ms": 5.80460223718546,
+      "index_ms": 30.3079160512425,
       "by_category": {
         "architecture": 0.9032867981913646,
         "semantic": 0.872911909678669,
@@ -1115,16 +1115,16 @@
     {
       "repo": "requests",
       "language": "python",
-      "mode": "hybrid",
+      "mode": "auto",
       "chunks": 169,
       "tokens": 3016,
       "ndcg5": 0.9652540586697873,
       "ndcg10": 0.9652540586697873,
-      "p50_ms": 0.47441700735362247,
-      "p90_ms": 4.540421403362416,
-      "p95_ms": 4.631245505152037,
-      "p99_ms": 4.6660154934215825,
-      "index_ms": 68.44233299489133,
+      "p50_ms": 0.49322948325425386,
+      "p90_ms": 4.849058639956638,
+      "p95_ms": 4.8558580107055604,
+      "p99_ms": 4.9227379891090095,
+      "index_ms": 76.11029199324548,
       "by_category": {
         "architecture": 0.9709908720694624,
         "semantic": 0.9385181336136883,
@@ -1134,16 +1134,16 @@
     {
       "repo": "serde",
       "language": "rust",
-      "mode": "hybrid",
+      "mode": "auto",
       "chunks": 1178,
-      "tokens": 3023,
+      "tokens": 3017,
       "ndcg5": 0.7965338279036697,
       "ndcg10": 0.8301174310983572,
-      "p50_ms": 1.3143124961061403,
-      "p90_ms": 7.847875000152275,
-      "p95_ms": 10.408910393744009,
-      "p99_ms": 11.04974847883568,
-      "index_ms": 503.1043750059325,
+      "p50_ms": 1.3008539972361177,
+      "p90_ms": 8.087304211221639,
+      "p95_ms": 10.411131626460701,
+      "p99_ms": 10.927393559832126,
+      "index_ms": 495.4705420532264,
       "by_category": {
         "architecture": 0.8543823750838853,
         "semantic": 0.6764208118547154,
@@ -1153,16 +1153,16 @@
     {
       "repo": "sinatra",
       "language": "ruby",
-      "mode": "hybrid",
+      "mode": "auto",
       "chunks": 70,
       "tokens": 2831,
       "ndcg5": 0.9530803155822426,
       "ndcg10": 0.9530803155822426,
-      "p50_ms": 0.47072900633793324,
-      "p90_ms": 7.945425306388643,
-      "p95_ms": 8.074152105837129,
-      "p99_ms": 8.23416402505245,
-      "index_ms": 33.77162499236874,
+      "p50_ms": 0.46131250564940274,
+      "p90_ms": 7.793379505164921,
+      "p95_ms": 7.922491952194832,
+      "p99_ms": 7.957831203821115,
+      "index_ms": 35.63395899254829,
       "by_category": {
         "architecture": 0.8123212623289702,
         "semantic": 1.0,
@@ -1172,16 +1172,16 @@
     {
       "repo": "snapkit",
       "language": "swift",
-      "mode": "hybrid",
+      "mode": "auto",
       "chunks": 107,
       "tokens": 3153,
       "ndcg5": 0.7723856192940887,
       "ndcg10": 0.7872645734184941,
-      "p50_ms": 3.9077080000424758,
-      "p90_ms": 8.37871660187375,
-      "p95_ms": 10.841124999569722,
-      "p99_ms": 13.099224996985862,
-      "index_ms": 43.42112499580253,
+      "p50_ms": 4.306499962694943,
+      "p90_ms": 9.042775211855771,
+      "p95_ms": 12.01840878929942,
+      "p99_ms": 14.856548919342453,
+      "index_ms": 43.9603750128299,
       "by_category": {
         "architecture": 0.6399069297160626,
         "semantic": 0.7592455236131767,
@@ -1191,16 +1191,16 @@
     {
       "repo": "starlette",
       "language": "python",
-      "mode": "hybrid",
+      "mode": "auto",
       "chunks": 214,
       "tokens": 2876,
       "ndcg5": 0.9339593901316886,
       "ndcg10": 0.9427487090259538,
-      "p50_ms": 0.5873329937458038,
-      "p90_ms": 4.390792004414834,
-      "p95_ms": 4.849791992455721,
-      "p99_ms": 4.865458398126066,
-      "index_ms": 90.21633298834786,
+      "p50_ms": 0.5739160114899278,
+      "p90_ms": 4.412334004882723,
+      "p95_ms": 4.82458301121369,
+      "p99_ms": 4.988016618881375,
+      "index_ms": 92.47533301822841,
       "by_category": {
         "architecture": 0.8907020808677296,
         "semantic": 1.0,
@@ -1210,16 +1210,16 @@
     {
       "repo": "telescope.nvim",
       "language": "lua",
-      "mode": "hybrid",
+      "mode": "auto",
       "chunks": 544,
       "tokens": 3061,
       "ndcg5": 0.8024434932958862,
       "ndcg10": 0.8024434932958862,
-      "p50_ms": 0.6600414926651865,
-      "p90_ms": 0.7375785906333476,
-      "p95_ms": 0.9762440924532745,
-      "p99_ms": 4.581716014072293,
-      "index_ms": 235.38995800481644,
+      "p50_ms": 0.6670624716207385,
+      "p90_ms": 0.7122247363440692,
+      "p95_ms": 0.9973937354516274,
+      "p99_ms": 4.7995787335094,
+      "index_ms": 237.65654204180464,
       "by_category": {
         "architecture": 0.8805425336407291,
         "semantic": 0.760390163879432
@@ -1228,16 +1228,16 @@
     {
       "repo": "tokio",
       "language": "rust",
-      "mode": "hybrid",
+      "mode": "auto",
       "chunks": 2758,
-      "tokens": 3486,
+      "tokens": 3492,
       "ndcg5": 0.9438607657669025,
       "ndcg10": 0.9530895506058809,
-      "p50_ms": 1.0996044948115014,
-      "p90_ms": 9.666079202725088,
-      "p95_ms": 10.479194096114952,
-      "p99_ms": 11.422006025968583,
-      "index_ms": 1222.9317919991445,
+      "p50_ms": 1.0944369714707136,
+      "p90_ms": 9.424395515816288,
+      "p95_ms": 10.10447054868564,
+      "p99_ms": 10.908361317124216,
+      "index_ms": 1234.3772920430638,
       "by_category": {
         "architecture": 0.8436318353529363,
         "semantic": 1.0,
@@ -1247,16 +1247,16 @@
     {
       "repo": "trpc",
       "language": "typescript",
-      "mode": "hybrid",
+      "mode": "auto",
       "chunks": 363,
       "tokens": 2942,
       "ndcg5": 0.8117219727220212,
       "ndcg10": 0.8318711294019078,
-      "p50_ms": 4.722396006400231,
-      "p90_ms": 6.073933700099587,
-      "p95_ms": 6.500069408502898,
-      "p99_ms": 9.555047484172968,
-      "index_ms": 151.68104199983645,
+      "p50_ms": 4.919499973766506,
+      "p90_ms": 6.31486700149253,
+      "p95_ms": 6.751681555761027,
+      "p99_ms": 9.721602707868437,
+      "index_ms": 147.5726249627769,
       "by_category": {
         "architecture": 0.7751964340658473,
         "semantic": 0.7765501593587683,
@@ -1266,16 +1266,16 @@
     {
       "repo": "vapor",
       "language": "swift",
-      "mode": "hybrid",
+      "mode": "auto",
       "chunks": 796,
       "tokens": 2553,
       "ndcg5": 0.7740663550396519,
       "ndcg10": 0.828789449954672,
-      "p50_ms": 0.9356454975204542,
-      "p90_ms": 5.97867890028283,
-      "p95_ms": 6.119454449071782,
-      "p99_ms": 6.262523691548267,
-      "index_ms": 343.6642909946386,
+      "p50_ms": 0.9280630038119853,
+      "p90_ms": 6.0062377830035985,
+      "p95_ms": 6.143606247496791,
+      "p99_ms": 6.169921248801984,
+      "index_ms": 337.47962495544925,
       "by_category": {
         "architecture": 0.5394794582550125,
         "semantic": 0.8540964731663144,
@@ -1285,16 +1285,16 @@
     {
       "repo": "vitest",
       "language": "typescript",
-      "mode": "hybrid",
+      "mode": "auto",
       "chunks": 1090,
       "tokens": 2797,
       "ndcg5": 0.6573465818787765,
       "ndcg10": 0.6929673005895788,
-      "p50_ms": 0.9439165005460382,
-      "p90_ms": 6.939696203335189,
-      "p95_ms": 7.915740196767732,
-      "p99_ms": 11.307714438007674,
-      "index_ms": 447.617124998942,
+      "p50_ms": 0.9613540023565292,
+      "p90_ms": 7.3021381511352965,
+      "p95_ms": 8.303716659429487,
+      "p99_ms": 11.858109733439045,
+      "index_ms": 442.2005829983391,
       "by_category": {
         "architecture": 0.6132788343159646,
         "semantic": 0.6862493865749392,
@@ -1304,16 +1304,16 @@
     {
       "repo": "xmonad",
       "language": "haskell",
-      "mode": "hybrid",
+      "mode": "auto",
       "chunks": 124,
       "tokens": 3034,
       "ndcg5": 0.8039694436225424,
       "ndcg10": 0.8141885635019669,
-      "p50_ms": 0.48554150271229446,
-      "p90_ms": 4.837362193211448,
-      "p95_ms": 5.144191647559637,
-      "p99_ms": 5.375104730046587,
-      "index_ms": 60.82770899229217,
+      "p50_ms": 0.473999505629763,
+      "p90_ms": 4.83410419546999,
+      "p95_ms": 4.9160961410962045,
+      "p99_ms": 5.1734192366711795,
+      "index_ms": 63.62349999835715,
       "by_category": {
         "architecture": 0.7691051895584848,
         "semantic": 0.8442441461309548
@@ -1322,16 +1322,16 @@
     {
       "repo": "zig",
       "language": "zig",
-      "mode": "hybrid",
+      "mode": "auto",
       "chunks": 13307,
       "tokens": 3112,
       "ndcg5": 0.9196394630357186,
       "ndcg10": 0.9196394630357186,
-      "p50_ms": 3.1986040048650466,
-      "p90_ms": 32.74232530093287,
-      "p95_ms": 36.29184790042928,
-      "p99_ms": 40.6842359850998,
-      "index_ms": 5426.529041011236,
+      "p50_ms": 3.1882080365903676,
+      "p90_ms": 32.719475327758126,
+      "p95_ms": 36.40182919625659,
+      "p99_ms": 42.04033305461052,
+      "index_ms": 6533.802125020884,
       "by_category": {
         "architecture": 0.7103099178571526,
         "semantic": 0.9565799710084067
@@ -1340,16 +1340,16 @@
     {
       "repo": "zig-clap",
       "language": "zig",
-      "mode": "hybrid",
+      "mode": "auto",
       "chunks": 100,
       "tokens": 2525,
       "ndcg5": 0.9380929753571458,
       "ndcg10": 0.9380929753571458,
-      "p50_ms": 0.5309585030772723,
-      "p90_ms": 4.4691338916891254,
-      "p95_ms": 4.6746767475269735,
-      "p99_ms": 4.748301755171269,
-      "index_ms": 67.56016598956194,
+      "p50_ms": 0.5207709909882396,
+      "p90_ms": 4.470046085771173,
+      "p95_ms": 4.648328878101893,
+      "p99_ms": 4.7242657985771075,
+      "index_ms": 55.59833301231265,
       "by_category": {
         "architecture": 1.0,
         "semantic": 0.9312144170634953
@@ -1358,16 +1358,16 @@
     {
       "repo": "zls",
       "language": "zig",
-      "mode": "hybrid",
+      "mode": "auto",
       "chunks": 1319,
       "tokens": 2934,
       "ndcg5": 0.8761859507142915,
       "ndcg10": 0.8761859507142915,
-      "p50_ms": 0.8124579981085844,
-      "p90_ms": 0.8837878078338691,
-      "p95_ms": 1.3312083472556024,
-      "p99_ms": 7.192075267230384,
-      "index_ms": 734.8769590025768,
+      "p50_ms": 0.8163540042005479,
+      "p90_ms": 0.8719455276150259,
+      "p95_ms": 1.3746558775892537,
+      "p99_ms": 7.393063979106945,
+      "index_ms": 604.4117499841377,
       "by_category": {
         "architecture": 0.804418536224494,
         "semantic": 0.9148299431318748
@@ -1376,16 +1376,16 @@
     {
       "repo": "zod",
       "language": "typescript",
-      "mode": "hybrid",
+      "mode": "auto",
       "chunks": 1812,
       "tokens": 2865,
       "ndcg5": 0.595861623462428,
       "ndcg10": 0.6136719828178292,
-      "p50_ms": 7.1065625015762635,
-      "p90_ms": 8.842266905412544,
-      "p95_ms": 9.122495204064766,
-      "p99_ms": 12.017399040487357,
-      "index_ms": 1027.3836249980377,
+      "p50_ms": 7.352958025876433,
+      "p90_ms": 9.013220487395301,
+      "p95_ms": 9.315005911048505,
+      "p99_ms": 12.54953480092808,
+      "index_ms": 849.7138330130838,
       "by_category": {
         "architecture": 0.6297620990369716,
         "semantic": 0.586420115895172,
diff --git a/benchmarks/run_benchmark.py b/benchmarks/run_benchmark.py
index 9e9a3e0..4af095e 100644
--- a/benchmarks/run_benchmark.py
+++ b/benchmarks/run_benchmark.py
@@ -5,7 +5,6 @@
 from dataclasses import asdict, dataclass, field
 
 import numpy as np
-from model2vec import StaticModel
 
 from benchmarks.data import (
     RepoSpec,
@@ -188,7 +187,7 @@ def _print_summary(results: list[RepoResult]) -> None:
 
 
 def _bench_quality(
-    repo_tasks: dict[str, list[Task]], model: StaticModel, specs: dict[str, RepoSpec], *, verbose: bool = False
+    repo_tasks: dict[str, list[Task]], specs: dict[str, RepoSpec], *, verbose: bool = False
 ) -> list[RepoResult]:
     """Run quality benchmarks (NDCG@5, NDCG@10, latency) for each repo."""
     print(
@@ -204,7 +203,7 @@ def _bench_quality(
     for repo, tasks in sorted(repo_tasks.items()):
         spec = specs[repo]
         started = time.perf_counter()
-        index = SembleIndex.from_path(spec.benchmark_dir, model=model)
+        index = SembleIndex.from_path(spec.benchmark_dir)
         index_ms = (time.perf_counter() - started) * 1000
         ndcg5, ndcg10, latencies, by_category, tokens = evaluate(index, tasks, verbose=verbose)
         p50, p90, p95, p99 = np.percentile(latencies, [50, 90, 95, 99]).tolist()
@@ -299,11 +298,10 @@ def main() -> None:
     repo_specs, tasks = load_filtered_tasks(args.repo or None, args.language or None)
     print("Loading model...", file=sys.stderr)
     started = time.perf_counter()
-    model = StaticModel.from_pretrained(_DEFAULT_MODEL_NAME)
     print(f"Loaded in {(time.perf_counter() - started) * 1000:.0f} ms", file=sys.stderr)
     print(file=sys.stderr)
     repo_tasks = grouped_tasks(tasks)
-    results = _bench_quality(repo_tasks, model, repo_specs, verbose=args.verbose)
+    results = _bench_quality(repo_tasks, repo_specs, verbose=args.verbose)
     _print_summary(results)
     if not args.repo and not args.language:
         _save_results(results)
diff --git a/benchmarks/speed_benchmark.py b/benchmarks/speed_benchmark.py
index 717598f..b96ad75 100644
--- a/benchmarks/speed_benchmark.py
+++ b/benchmarks/speed_benchmark.py
@@ -12,7 +12,7 @@
 from benchmarks.tools import run_colgrep_files, run_ripgrep_count
 from semble import SembleIndex
 from semble.index.dense import _DEFAULT_MODEL_NAME
-from semble.types import EmbeddingMatrix, Encoder
+from semble.types import EmbeddingMatrix
 
 # One representative repo per language (medium size, healthy NDCG on the main benchmark).
 _REPOS: list[str] = [
@@ -89,7 +89,7 @@ def encode(self, texts: Sequence[str], /) -> EmbeddingMatrix:
 
 
 def _bench_semble(
-    spec: RepoSpec, tasks: list[Task], model: Encoder | None
+    spec: RepoSpec, tasks: list[Task], model: StaticModel | None
 ) -> tuple[float, SembleIndex, tuple[float, ...]]:
     """Index a repo with semble and measure query latency; return (index_ms, index, latencies_ms)."""
     started = time.perf_counter()
diff --git a/pyproject.toml b/pyproject.toml
index a35cc46..2c650ca 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -32,7 +32,8 @@ dependencies = [
     "bm25s>=0.2.0",
     "pathspec>=0.12",
     "tree-sitter>=0.25,<0.26",
-    "tree-sitter-language-pack>=1.0,<1.8.0,!=1.6.3"
+    "tree-sitter-language-pack>=1.0,<1.8.0,!=1.6.3",
+    "orjson"
 ]
 
 [project.optional-dependencies]
diff --git a/src/semble/__init__.py b/src/semble/__init__.py
index 136f345..6e7cf41 100644
--- a/src/semble/__init__.py
+++ b/src/semble/__init__.py
@@ -1,12 +1,11 @@
 from semble.index import SembleIndex
-from semble.types import Chunk, ContentType, EmbeddingMatrix, Encoder, IndexStats, SearchResult
+from semble.types import Chunk, ContentType, EmbeddingMatrix, IndexStats, SearchResult
 from semble.version import __version__
 
 __all__ = [
     "Chunk",
     "ContentType",
     "EmbeddingMatrix",
-    "Encoder",
     "IndexStats",
     "SearchResult",
     "SembleIndex",
diff --git a/src/semble/agents/claude.md b/src/semble/agents/claude.md
index a85b78c..895e282 100644
--- a/src/semble/agents/claude.md
+++ b/src/semble/agents/claude.md
@@ -12,6 +12,20 @@ semble search "save_pretrained" ./my-project
 semble search "save model to disk" ./my-project --top-k 10
 ```
 
+If you anticipate doing more than one search, use `semble index` to create an index.
+
+```bash
+semble index ./my-project -o my_index
+```
+
+You can then reuse this index later on:
+
+```bash
+semble search "save_pretrained" --index my_index
+```
+
+An index is not automatically updated, so if the code changes significantly, reindex. If you notice stale results while resolving searches to files, reindex.
+
 Use `--content docs` to search documentation and prose, `--content config` for config files (yaml, toml, etc.), or `--content all` to search code, docs, and config:
 
 ```bash
@@ -26,14 +40,17 @@ Use `semble find-related` to discover code similar to a known location (pass `fi
 semble find-related src/auth.py 42 ./my-project
 ```
 
+Like search, `find-related` also accepts an `--index` argument.
+
 `path` defaults to the current directory when omitted; git URLs are accepted.
 
 If `semble` is not on `$PATH`, use `uvx --from "semble[mcp]" semble` in its place.
 
-## Workflow
+### Workflow
 
-1. Start with `semble search` to find relevant chunks.
-2. Use `--content docs` for documentation, `--content config` for config files, or `--content all` for everything.
-3. Inspect full files only when the returned chunk is not enough context.
-4. Optionally use `semble find-related` with a promising result's `file_path` and `line` to discover related implementations.
-5. Use grep only when you need exhaustive literal matches or quick confirmation of an exact string.
+1. Index the repo using `semble index -o cached_index`.
+2. Start with `semble search` to find relevant chunks. Pass the index to achieve results faster.
+3. Use `--content docs` for documentation, `--content config` for config files, or `--content all` for everything.
+4. Inspect full files only when the returned chunk does not give enough context.
+5. Optionally use `semble find-related` with a promising result's `file_path` and `line` to discover related implementations.
+6. Use grep only when you need exhaustive literal matches or quick confirmation of an exact string.
diff --git a/src/semble/agents/copilot.md b/src/semble/agents/copilot.md
index a85b78c..895e282 100644
--- a/src/semble/agents/copilot.md
+++ b/src/semble/agents/copilot.md
@@ -12,6 +12,20 @@ semble search "save_pretrained" ./my-project
 semble search "save model to disk" ./my-project --top-k 10
 ```
 
+If you anticipate doing more than one search, use `semble index` to create an index.
+
+```bash
+semble index ./my-project -o my_index
+```
+
+You can then reuse this index later on:
+
+```bash
+semble search "save_pretrained" --index my_index
+```
+
+An index is not automatically updated, so if the code changes significantly, reindex. If you notice stale results while resolving searches to files, reindex.
+
 Use `--content docs` to search documentation and prose, `--content config` for config files (yaml, toml, etc.), or `--content all` to search code, docs, and config:
 
 ```bash
@@ -26,14 +40,17 @@ Use `semble find-related` to discover code similar to a known location (pass `fi
 semble find-related src/auth.py 42 ./my-project
 ```
 
+Like search, `find-related` also accepts an `--index` argument.
+
 `path` defaults to the current directory when omitted; git URLs are accepted.
 
 If `semble` is not on `$PATH`, use `uvx --from "semble[mcp]" semble` in its place.
 
-## Workflow
+### Workflow
 
-1. Start with `semble search` to find relevant chunks.
-2. Use `--content docs` for documentation, `--content config` for config files, or `--content all` for everything.
-3. Inspect full files only when the returned chunk is not enough context.
-4. Optionally use `semble find-related` with a promising result's `file_path` and `line` to discover related implementations.
-5. Use grep only when you need exhaustive literal matches or quick confirmation of an exact string.
+1. Index the repo using `semble index -o cached_index`.
+2. Start with `semble search` to find relevant chunks. Pass the index to achieve results faster.
+3. Use `--content docs` for documentation, `--content config` for config files, or `--content all` for everything.
+4. Inspect full files only when the returned chunk does not give enough context.
+5. Optionally use `semble find-related` with a promising result's `file_path` and `line` to discover related implementations.
+6. Use grep only when you need exhaustive literal matches or quick confirmation of an exact string.
diff --git a/src/semble/agents/cursor.md b/src/semble/agents/cursor.md
index 825ad7d..baf455c 100644
--- a/src/semble/agents/cursor.md
+++ b/src/semble/agents/cursor.md
@@ -11,6 +11,20 @@ semble search "save_pretrained" ./my-project
 semble search "save model to disk" ./my-project --top-k 10
 ```
 
+If you anticipate doing more than one search, use `semble index` to create an index.
+
+```bash
+semble index ./my-project -o my_index
+```
+
+You can then reuse this index later on:
+
+```bash
+semble search "save_pretrained" --index my_index
+```
+
+An index is not automatically updated, so if the code changes significantly, reindex. If you notice stale results while resolving searches to files, reindex.
+
 Use `--content docs` to search documentation and prose, `--content config` for config files (yaml, toml, etc.), or `--content all` to search code, docs, and config:
 
 ```bash
@@ -25,14 +39,17 @@ Use `semble find-related` to discover code similar to a known location (pass `fi
 semble find-related src/auth.py 42 ./my-project
 ```
 
+Like search, `find-related` also accepts an `--index` argument.
+
 `path` defaults to the current directory when omitted; git URLs are accepted.
 
 If `semble` is not on `$PATH`, use `uvx --from "semble[mcp]" semble` in its place.
 
-## Workflow
+### Workflow
 
-1. Start with `semble search` to find relevant chunks.
-2. Use `--content docs` for documentation, `--content config` for config files, or `--content all` for everything.
-3. Inspect full files only when the returned chunk is not enough context.
-4. Optionally use `semble find-related` with a promising result's `file_path` and `line` to discover related implementations.
-5. Use grep only when you need exhaustive literal matches or quick confirmation of an exact string.
+1. Index the repo using `semble index -o cached_index`.
+2. Start with `semble search` to find relevant chunks. Pass the index to achieve results faster.
+3. Use `--content docs` for documentation, `--content config` for config files, or `--content all` for everything.
+4. Inspect full files only when the returned chunk does not give enough context.
+5. Optionally use `semble find-related` with a promising result's `file_path` and `line` to discover related implementations.
+6. Use grep only when you need exhaustive literal matches or quick confirmation of an exact string.
diff --git a/src/semble/agents/gemini.md b/src/semble/agents/gemini.md
index 4e82f9f..e4e9b6a 100644
--- a/src/semble/agents/gemini.md
+++ b/src/semble/agents/gemini.md
@@ -14,6 +14,20 @@ semble search "save_pretrained" ./my-project
 semble search "save model to disk" ./my-project --top-k 10
 ```
 
+If you anticipate doing more than one search, use `semble index` to create an index.
+
+```bash
+semble index ./my-project -o my_index
+```
+
+You can then reuse this index later on:
+
+```bash
+semble search "save_pretrained" --index my_index
+```
+
+An index is not automatically updated, so if the code changes significantly, reindex. If you notice stale results while resolving searches to files, reindex.
+
 Use `--content docs` to search documentation and prose, `--content config` for config files (yaml, toml, etc.), or `--content all` to search code, docs, and config:
 
 ```bash
@@ -28,14 +42,17 @@ Use `semble find-related` to discover code similar to a known location (pass `fi
 semble find-related src/auth.py 42 ./my-project
 ```
 
+Like search, `find-related` also accepts an `--index` argument.
+
 `path` defaults to the current directory when omitted; git URLs are accepted.
 
 If `semble` is not on `$PATH`, use `uvx --from "semble[mcp]" semble` in its place.
 
-## Workflow
+### Workflow
 
-1. Start with `semble search` to find relevant chunks.
-2. Use `--content docs` for documentation, `--content config` for config files, or `--content all` for everything.
-3. Inspect full files only when the returned chunk is not enough context.
-4. Optionally use `semble find-related` with a promising result's `file_path` and `line` to discover related implementations.
-5. Use grep only when you need exhaustive literal matches or quick confirmation of an exact string.
+1. Index the repo using `semble index -o cached_index`.
+2. Start with `semble search` to find relevant chunks. Pass the index to achieve results faster.
+3. Use `--content docs` for documentation, `--content config` for config files, or `--content all` for everything.
+4. Inspect full files only when the returned chunk does not give enough context.
+5. Optionally use `semble find-related` with a promising result's `file_path` and `line` to discover related implementations.
+6. Use grep only when you need exhaustive literal matches or quick confirmation of an exact string.
diff --git a/src/semble/agents/kiro.md b/src/semble/agents/kiro.md
index d3cf869..d556c13 100644
--- a/src/semble/agents/kiro.md
+++ b/src/semble/agents/kiro.md
@@ -14,6 +14,20 @@ semble search "save_pretrained" ./my-project
 semble search "save model to disk" ./my-project --top-k 10
 ```
 
+If you anticipate doing more than one search, use `semble index` to create an index.
+
+```bash
+semble index ./my-project -o my_index
+```
+
+You can then reuse this index later on:
+
+```bash
+semble search "save_pretrained" --index my_index
+```
+
+An index is not automatically updated, so if the code changes significantly, reindex. If you notice stale results while resolving searches to files, reindex.
+
 Use `--content docs` to search documentation and prose, `--content config` for config files (yaml, toml, etc.), or `--content all` to search code, docs, and config:
 
 ```bash
@@ -28,14 +42,17 @@ Use `semble find-related` to discover code similar to a known location (pass `fi
 semble find-related src/auth.py 42 ./my-project
 ```
 
+Like search, `find-related` also accepts an `--index` argument.
+
 `path` defaults to the current directory when omitted; git URLs are accepted.
 
 If `semble` is not on `$PATH`, use `uvx --from "semble[mcp]" semble` in its place.
 
-## Workflow
+### Workflow
 
-1. Start with `semble search` to find relevant chunks.
-2. Use `--content docs` for documentation, `--content config` for config files, or `--content all` for everything.
-3. Inspect full files only when the returned chunk is not enough context.
-4. Optionally use `semble find-related` with a promising result's `file_path` and `line` to discover related implementations.
-5. Use grep only when you need exhaustive literal matches or quick confirmation of an exact string.
+1. Index the repo using `semble index -o cached_index`.
+2. Start with `semble search` to find relevant chunks. Pass the index to achieve results faster.
+3. Use `--content docs` for documentation, `--content config` for config files, or `--content all` for everything.
+4. Inspect full files only when the returned chunk does not give enough context.
+5. Optionally use `semble find-related` with a promising result's `file_path` and `line` to discover related implementations.
+6. Use grep only when you need exhaustive literal matches or quick confirmation of an exact string.
diff --git a/src/semble/agents/opencode.md b/src/semble/agents/opencode.md
index 00eacb1..2ec43c8 100644
--- a/src/semble/agents/opencode.md
+++ b/src/semble/agents/opencode.md
@@ -15,6 +15,20 @@ semble search "save_pretrained" ./my-project
 semble search "save model to disk" ./my-project --top-k 10
 ```
 
+If you anticipate doing more than one search, use `semble index` to create an index.
+
+```bash
+semble index ./my-project -o my_index
+```
+
+You can then reuse this index later on:
+
+```bash
+semble search "save_pretrained" --index my_index
+```
+
+An index is not automatically updated, so if the code changes significantly, reindex. If you notice stale results while resolving searches to files, reindex.
+
 Use `--content docs` to search documentation and prose, `--content config` for config files (yaml, toml, etc.), or `--content all` to search code, docs, and config:
 
 ```bash
@@ -29,14 +43,17 @@ Use `semble find-related` to discover code similar to a known location (pass `fi
 semble find-related src/auth.py 42 ./my-project
 ```
 
+Like search, `find-related` also accepts an `--index` argument.
+
 `path` defaults to the current directory when omitted; git URLs are accepted.
 
 If `semble` is not on `$PATH`, use `uvx --from "semble[mcp]" semble` in its place.
 
-## Workflow
+### Workflow
 
-1. Start with `semble search` to find relevant chunks.
-2. Use `--content docs` for documentation, `--content config` for config files, or `--content all` for everything.
-3. Inspect full files only when the returned chunk is not enough context.
-4. Optionally use `semble find-related` with a promising result's `file_path` and `line` to discover related implementations.
-5. Use grep only when you need exhaustive literal matches or quick confirmation of an exact string.
+1. Index the repo using `semble index -o cached_index`.
+2. Start with `semble search` to find relevant chunks. Pass the index to achieve results faster.
+3. Use `--content docs` for documentation, `--content config` for config files, or `--content all` for everything.
+4. Inspect full files only when the returned chunk does not give enough context.
+5. Optionally use `semble find-related` with a promising result's `file_path` and `line` to discover related implementations.
+6. Use grep only when you need exhaustive literal matches or quick confirmation of an exact string.
diff --git a/src/semble/cli.py b/src/semble/cli.py
index 1e026e8..441dd1c 100644
--- a/src/semble/cli.py
+++ b/src/semble/cli.py
@@ -12,7 +12,7 @@
 from semble.index import SembleIndex
 from semble.stats import format_savings_report
 from semble.types import ContentType
-from semble.utils import _format_results, _is_git_url, _resolve_chunk
+from semble.utils import format_results, is_git_url, resolve_chunk
 
 
 class Agent(str, Enum):
@@ -25,7 +25,7 @@ class Agent(str, Enum):
 
 
 _DEFAULT_AGENT = Agent.CLAUDE
-_CLI_DISPATCH_ARGS = frozenset({"search", "find-related", "init", "savings", "-h", "--help"})
+_CLI_DISPATCH_ARGS = frozenset({"search", "find-related", "init", "savings", "-h", "--help", "index"})
 
 
 def _agent_path(agent: Agent) -> Path:
@@ -82,6 +82,16 @@ def _mcp_main() -> None:
     asyncio.run(serve(args.path, ref=args.ref, content=content))
 
 
+def _run_index(*, path: str, include_text_files: bool = False, out: str) -> None:
+    """Index and store a codebase."""
+    if is_git_url(path):
+        index = SembleIndex.from_git(path, include_text_files=include_text_files)
+    else:
+        index = SembleIndex.from_path(path, include_text_files=include_text_files)
+    Path(out).mkdir(parents=True, exist_ok=True)
+    index.save(out)
+
+
 def _run_init(*, agent: Agent = _DEFAULT_AGENT, force: bool = False) -> None:
     """Write the semble sub-agent file for the given coding agent into the current project."""
     dest = _agent_path(agent)
@@ -111,10 +121,20 @@ def _cli_main() -> None:
     parser = argparse.ArgumentParser(prog="semble")
     sub = parser.add_subparsers(dest="command")
 
+    index_p = sub.add_parser("index", help="Index and store a codebase.")
+    index_p.add_argument("path", nargs="?", default=".", help="Local path or git URL (default: current directory).")
+    index_p.add_argument(
+        "--include-text-files",
+        action="store_true",
+        help="Also index non-code text files (.md, .yaml, .json, etc.).",
+    )
+    index_p.add_argument("-o", "--out", type=str, required=True, help="The path to write the pre-built index to.")
+
     search_p = sub.add_parser("search", help="Search a codebase.")
     search_p.add_argument("query", help="Natural language or code query.")
     search_p.add_argument("path", nargs="?", default=".", help="Local path or git URL (default: current directory).")
     search_p.add_argument("-k", "--top-k", type=int, default=5, help="Number of results (default: 5).")
+    search_p.add_argument("--index", type=str, default=None, help="A path pointing to a pre-built index.")
     _add_content_args(search_p)
 
     related_p = sub.add_parser("find-related", help="Find code similar to a specific location.")
@@ -122,6 +142,7 @@ def _cli_main() -> None:
     related_p.add_argument("line", type=int, help="Line number (1-indexed).")
     related_p.add_argument("path", nargs="?", default=".", help="Local path or git URL (default: current directory).")
     related_p.add_argument("-k", "--top-k", type=int, default=5, help="Number of results (default: 5).")
+    related_p.add_argument("--index", type=str, default=None, help="A path pointing to a pre-built index.")
     _add_content_args(related_p)
 
     init_p = sub.add_parser("init", help="Write a semble sub-agent file for your coding agent.")
@@ -143,26 +164,33 @@ def _cli_main() -> None:
         _run_init(agent=Agent(args.agent), force=args.force)
         return
 
+    if args.command == "index":
+        _run_index(path=args.path, include_text_files=args.include_text_files, out=args.out)
+        return
+
     if args.command == "savings":
         print(format_savings_report(verbose=args.verbose), end="")
         return
 
-    content = _resolve_content(args.content, args.include_text_files)
-    index = (
-        SembleIndex.from_git(args.path, content=content)
-        if _is_git_url(args.path)
-        else SembleIndex.from_path(args.path, content=content)
-    )
+    if args.index:
+        index = SembleIndex.load_from_disk(args.index)
+    else:
+        content = _resolve_content(args.content, args.include_text_files)
+        index = (
+            SembleIndex.from_git(args.path, content=content)
+            if is_git_url(args.path)
+            else SembleIndex.from_path(args.path, content=content)
+        )
 
     if args.command == "search":
         results = index.search(args.query, top_k=args.top_k)
         if not results:
             print("No results found.")
         else:
-            print(_format_results(f"Search results for: {args.query!r}", results))
+            print(format_results(f"Search results for: {args.query!r}", results))
 
     elif args.command == "find-related":
-        chunk = _resolve_chunk(index.chunks, args.file_path, args.line)
+        chunk = resolve_chunk(index.chunks, args.file_path, args.line)
         if chunk is None:
             print(f"No chunk found at {args.file_path}:{args.line}.", file=sys.stderr)
             sys.exit(1)
@@ -170,4 +198,4 @@ def _cli_main() -> None:
         if not results:
             print(f"No related chunks found for {args.file_path}:{args.line}.")
         else:
-            print(_format_results(f"Chunks related to {args.file_path}:{args.line}", results))
+            print(format_results(f"Chunks related to {args.file_path}:{args.line}", results))
diff --git a/src/semble/index/create.py b/src/semble/index/create.py
index 19f95ef..b72a055 100644
--- a/src/semble/index/create.py
+++ b/src/semble/index/create.py
@@ -3,6 +3,7 @@
 from pathlib import Path
 
 import bm25s
+from model2vec.model import StaticModel
 from vicinity.backends.basic import BasicArgs
 
 from semble.chunking import chunk_source
@@ -11,14 +12,14 @@
 from semble.index.files import detect_language, get_extensions
 from semble.index.sparse import enrich_for_bm25
 from semble.tokens import tokenize
-from semble.types import Chunk, ContentType, Encoder
+from semble.types import Chunk, ContentType
 
 _MAX_FILE_BYTES = 1_000_000  # 1 MB max file size to read and index
 
 
 def create_index_from_path(
     path: Path,
-    model: Encoder,
+    model: StaticModel,
     extensions: Sequence[str] | None = None,
     content: ContentType | Sequence[ContentType] = (ContentType.CODE,),
     display_root: Path | None = None,
diff --git a/src/semble/index/dense.py b/src/semble/index/dense.py
index fcec51a..9677c22 100644
--- a/src/semble/index/dense.py
+++ b/src/semble/index/dense.py
@@ -1,4 +1,7 @@
-from typing import cast
+from __future__ import annotations
+
+from functools import cache
+from pathlib import Path
 
 import numpy as np
 import numpy.typing as npt
@@ -8,25 +11,33 @@
 from vicinity.datatypes import QueryResult
 from vicinity.utils import normalize
 
-from semble.types import Chunk, Encoder
+from semble.types import Chunk
 
 _DEFAULT_MODEL_NAME = "minishlab/potion-code-16M"
 
 
-def load_model(model_path: str | None = None) -> Encoder:
-    """Return the current model, loading the default if none was provided."""
-    if model_path is None:
-        model_path = _DEFAULT_MODEL_NAME
+@cache
+def _load_cached(model_path: str) -> StaticModel:
+    """Load a model and cache it, but only after the path resolves."""
     # Disable HF progress bars since the model is loaded silently in the background during indexing.
     disable_progress_bars()
     try:
         model = StaticModel.from_pretrained(model_path, force_download=False)
     finally:
         disable_progress_bars()
-    return cast(Encoder, model)
 
+    return model
+
+
+def load_model(model_path: str | None = None) -> tuple[StaticModel, str]:
+    """Return the current model, loading the default if none was provided."""
+    if model_path is None:
+        model_path = _DEFAULT_MODEL_NAME
+    model = _load_cached(model_path)
+    return model, model_path
 
-def embed_chunks(model: Encoder, chunks: list[Chunk]) -> npt.NDArray[np.float32]:
+
+def embed_chunks(model: StaticModel, chunks: list[Chunk]) -> npt.NDArray[np.float32]:
     """Embed chunks using the configured model."""
     if not chunks:
         return np.empty((0, model.dim), dtype=np.float32)
@@ -79,3 +90,14 @@ def query(self, vectors: npt.NDArray, k: int, selector: npt.NDArray[np.int_] | N
             out.extend(zip(sorted_indices, sorted_distances))
 
         return out
+
+    def save(self, path: Path) -> None:
+        """Save the selectable basic backend."""
+        path.mkdir(parents=True, exist_ok=True)
+        super().save(path)
+
+    @classmethod
+    def load(cls, path: Path) -> "SelectableBasicBackend":
+        """Load a selectable basic backend."""
+        loaded = super().load(path)
+        return SelectableBasicBackend(loaded.vectors, loaded.arguments)
diff --git a/src/semble/index/index.py b/src/semble/index/index.py
index b78d03d..7949471 100644
--- a/src/semble/index/index.py
+++ b/src/semble/index/index.py
@@ -6,17 +6,21 @@
 import warnings
 from collections import defaultdict
 from collections.abc import Sequence
+from datetime import datetime
 from pathlib import Path
 
 import numpy as np
 import numpy.typing as npt
+import orjson
 from bm25s import BM25
+from model2vec.model import StaticModel
 
 from semble.index.create import create_index_from_path
 from semble.index.dense import SelectableBasicBackend, load_model
+from semble.index.types import PersistencePath
 from semble.search import _search_semantic, search
 from semble.stats import save_search_stats
-from semble.types import CallType, Chunk, ContentType, Encoder, IndexStats, SearchResult
+from semble.types import CallType, Chunk, ContentType, IndexStats, SearchResult
 
 _GIT_CLONE_TIMEOUT = int(os.environ.get("SEMBLE_CLONE_TIMEOUT", 60))
 _DEFAULT_CONTENT: tuple[ContentType, ...] = (ContentType.CODE,)
@@ -46,10 +50,11 @@ class SembleIndex:
 
     def __init__(
         self,
-        model: Encoder,
+        model: StaticModel,
         bm25_index: BM25,
         semantic_index: SelectableBasicBackend,
         chunks: list[Chunk],
+        model_path: str,
         root: Path | None = None,
         content: ContentType | Sequence[ContentType] = _DEFAULT_CONTENT,
     ) -> None:
@@ -59,13 +64,15 @@ def __init__(
         :param bm25_index: The bm25 index.
         :param semantic_index: The semantic index.
         :param chunks: The found chunks.
+        :param model_path: Path to the model file.
         :param root: Root directory used to read file sizes for token-savings stats.
         :param content: Content type used when indexing; controls the search pipeline.
         """
-        self.model: Encoder = model
+        self.model = model
         self.chunks: list[Chunk] = chunks
         self._bm25_index: BM25 = bm25_index
         self._semantic_index: SelectableBasicBackend = semantic_index
+        self._model_path: str = model_path
         self._root: Path | None = root
         self._content: tuple[ContentType, ...] = (content,) if isinstance(content, ContentType) else tuple(content)
         self._file_sizes: dict[str, int] = self._compute_file_sizes(root) if root else {}
@@ -113,24 +120,24 @@ def stats(self) -> IndexStats:
     def from_path(
         cls,
         path: str | Path,
-        model: Encoder | None = None,
         extensions: Sequence[str] | None = None,
         content: ContentType | Sequence[ContentType] = _DEFAULT_CONTENT,
         include_text_files: bool | None = None,
+        model_path: str | None = None,
     ) -> SembleIndex:
         """Create and index a SembleIndex from a directory.
 
         :param path: Root directory to index.
-        :param model: Embedding model to use. Defaults to potion-code-16M.
         :param extensions: File extensions to include. Defaults to a standard set of code extensions.
         :param content: Content types to index, e.g. ContentType.CODE or [ContentType.CODE, ContentType.DOCS].
         :param include_text_files: Deprecated. Pass a content sequence directly instead.
-        :return: An indexed SembleIndex. Chunk file paths are relative to path.
+        :param model_path: Path to the model to use. If None, the default model will be used.
+        :return: An indexed SembleIndex. Chunk file paths are relative to ``path``.
         :raises FileNotFoundError: If `path` does not exist.
         :raises NotADirectoryError: If `path` exists but is not a directory.
         """
+        model, model_path = load_model(model_path)
         normalized = _apply_include_text_files(content, include_text_files)
-        model = model or load_model()
         path = Path(path)
         if not path.exists():
             raise FileNotFoundError(f"Path does not exist: {path}")
@@ -145,15 +152,15 @@ def from_path(
             display_root=path,
         )
 
-        return SembleIndex(model, bm25, vicinity, chunks, root=path, content=normalized)
+        return SembleIndex(model, bm25, vicinity, chunks, model_path, root=path, content=normalized)
 
     @classmethod
     def from_git(
         cls,
         url: str,
         ref: str | None = None,
-        model: Encoder | None = None,
         extensions: Sequence[str] | None = None,
+        model_path: str | None = None,
         content: ContentType | Sequence[ContentType] = _DEFAULT_CONTENT,
         include_text_files: bool | None = None,
     ) -> SembleIndex:
@@ -166,11 +173,11 @@ def from_git(
 
         :param url: URL of the git repository to clone (any git provider).
         :param ref: Branch or tag to check out. Defaults to the remote HEAD.
-        :param model: Embedding model to use. Defaults to potion-code-16M.
         :param extensions: File extensions to include. Defaults to a standard set of code extensions.
+        :param model_path: Path to the model to use. If None, the default model will be used.
         :param content: Content types to index, e.g. (ContentType.CODE,) or (ContentType.CODE, ContentType.DOCS).
         :param include_text_files: Deprecated. Pass content=(ContentType.CODE, ContentType.DOCS, ...) instead.
-        :return: An indexed SembleIndex. Chunk file paths are repo-relative (e.g. src/foo.py).
+        :return: An indexed SembleIndex. Chunk file paths are repo-relative (e.g. ``src/foo.py``).
         :raises RuntimeError: If git is not on PATH, the clone fails, or times out.
         """
         normalized = _apply_include_text_files(content, include_text_files)
@@ -187,7 +194,8 @@ def from_git(
                 raise RuntimeError(f"git clone timed out for {url!r} (limit: {_GIT_CLONE_TIMEOUT} s)") from None
             if result.returncode != 0:
                 raise RuntimeError(f"git clone failed for {url!r}:\n{result.stderr.strip()}")
-            model = model or load_model()
+
+            model, model_path = load_model(model_path)
             resolved_path = Path(tmp_dir).resolve()
             bm25, vicinity, chunks = create_index_from_path(
                 resolved_path,
@@ -197,7 +205,7 @@ def from_git(
                 display_root=resolved_path,
             )
 
-            return SembleIndex(model, bm25, vicinity, chunks, root=resolved_path, content=normalized)
+            return SembleIndex(model, bm25, vicinity, chunks, model_path, root=resolved_path, content=normalized)
 
     def find_related(self, source: Chunk | SearchResult, *, top_k: int = 5) -> list[SearchResult]:
         """Return chunks semantically similar to the given chunk or search result.
@@ -267,3 +275,53 @@ def search(
         )
         save_search_stats(results, CallType.SEARCH, self._file_sizes)
         return results
+
+    @classmethod
+    def load_from_disk(cls: type[SembleIndex], path: Path | str) -> SembleIndex:
+        """Load the index from disk."""
+        path = Path(path)
+        if not path.exists():
+            raise FileNotFoundError(f"Index not found at {path}")
+        persistence_paths = PersistencePath.from_path(path)
+        non_existent = persistence_paths.non_existing()
+        if non_existent:
+            missing = ", ".join(str(p) for p in non_existent)
+            raise FileNotFoundError(f"Index not found at {path}. Missing: {missing}")
+
+        bm_25_index = BM25.load(persistence_paths.bm25_index)
+        semantic_index = SelectableBasicBackend.load(persistence_paths.semantic_index)
+        with open(persistence_paths.metadata, "r") as f:
+            metadata = orjson.loads(f.read())
+        with open(persistence_paths.chunks, "r") as f:
+            chunk_data = orjson.loads(f.read())
+
+        chunks = []
+        for chunk_item in chunk_data:
+            chunks.append(Chunk.from_dict(chunk_item))
+        root_path = metadata["root_path"]
+        model_path = metadata["model_path"]
+        if root_path:
+            root_path = Path(root_path)
+
+        model, model_path = load_model(model_path)
+
+        return cls(model, bm_25_index, semantic_index, chunks, model_path, root=root_path)
+
+    def save(self, path: Path | str) -> None:
+        """Save the index to disk."""
+        path = Path(path)
+        path.mkdir(parents=True, exist_ok=True)
+
+        persistence_paths = PersistencePath.from_path(path)
+
+        self._bm25_index.save(persistence_paths.bm25_index)
+        self._semantic_index.save(persistence_paths.semantic_index)
+        chunks_as_dict = [chunk.to_dict() for chunk in self.chunks]
+        with open(persistence_paths.chunks, "wb") as f:
+            data = orjson.dumps(chunks_as_dict)
+            f.write(data)
+        root_str = None if self._root is None else str(self._root)
+        metadata = {"root_path": root_str, "time": datetime.now().timestamp(), "model_path": self._model_path}
+        with open(persistence_paths.metadata, "wb") as f:
+            data = orjson.dumps(metadata)
+            f.write(data)
diff --git a/src/semble/index/types.py b/src/semble/index/types.py
new file mode 100644
index 0000000..fc3c7f1
--- /dev/null
+++ b/src/semble/index/types.py
@@ -0,0 +1,30 @@
+from __future__ import annotations
+
+from dataclasses import dataclass
+from pathlib import Path
+
+
+@dataclass
+class PersistencePath:
+    """Simple model so that the save/load roundtrip is typed."""
+
+    chunks: Path
+    bm25_index: Path
+    semantic_index: Path
+    metadata: Path
+
+    def non_existing(self) -> list[Path]:
+        """Return all resolved that do not exist."""
+        return [
+            path for path in [self.chunks, self.bm25_index, self.semantic_index, self.metadata] if not path.exists()
+        ]
+
+    @classmethod
+    def from_path(cls: type[PersistencePath], path: Path) -> PersistencePath:
+        """Create a PersistencePath from a base path."""
+        return PersistencePath(
+            chunks=path / "chunks.json",
+            bm25_index=path / "bm25_index",
+            semantic_index=path / "semantic_index",
+            metadata=path / "metadata.json",
+        )
diff --git a/src/semble/mcp.py b/src/semble/mcp.py
index 1c8e5e8..e502ac6 100644
--- a/src/semble/mcp.py
+++ b/src/semble/mcp.py
@@ -13,8 +13,8 @@
 
 from semble.index import SembleIndex
 from semble.index.dense import load_model
-from semble.types import ContentType, Encoder
-from semble.utils import _format_results, _is_git_url, _resolve_chunk
+from semble.types import ContentType
+from semble.utils import format_results, is_git_url, resolve_chunk
 
 logger = logging.getLogger(__name__)
 
@@ -33,7 +33,7 @@ async def _get_index(
     cache: _IndexCache,
 ) -> SembleIndex:
     """Return a cached index for a repo, rejecting unsafe git transport schemes."""
-    if repo is not None and _is_git_url(repo) and not repo.startswith(("https://", "http://")):
+    if repo is not None and is_git_url(repo) and not repo.startswith(("https://", "http://")):
         raise ValueError(f"Only https://, http://, or local directory paths are accepted as `repo`. Got: {repo!r}")
     source = repo or default_source
     if not source:
@@ -78,7 +78,7 @@ async def search(
         results = index.search(query, top_k=top_k)
         if not results:
             return "No results found."
-        return _format_results(f"Search results for: {query!r}", results)
+        return format_results(f"Search results for: {query!r}", results)
 
     @server.tool()
     async def find_related(
@@ -99,7 +99,7 @@ async def find_related(
             index = await _get_index(repo, default_source, cache)
         except ValueError as exc:
             return str(exc)
-        chunk = _resolve_chunk(index.chunks, file_path, line)
+        chunk = resolve_chunk(index.chunks, file_path, line)
         if chunk is None:
             return (
                 f"No chunk found at {file_path}:{line}. "
@@ -108,7 +108,7 @@ async def find_related(
         results = index.find_related(chunk, top_k=top_k)
         if not results:
             return f"No related chunks found for {file_path}:{line}."
-        return _format_results(f"Chunks related to {file_path}:{line}", results)
+        return format_results(f"Chunks related to {file_path}:{line}", results)
 
     return server
 
@@ -124,7 +124,7 @@ async def serve(
     async def _load_and_prewarm() -> None:
         """Pre-load the model and optionally pre-index the default source in parallel with starting the server."""
         try:
-            cache._model = await asyncio.to_thread(load_model)
+            _, cache._model_path = await asyncio.to_thread(load_model)
         except Exception as exc:
             logger.exception("Failed to load embedding model")
             cache._model_error = exc
@@ -136,7 +136,7 @@ async def _load_and_prewarm() -> None:
                 await cache.get(path, ref=ref)
             except Exception:
                 logger.warning("Failed to pre-index %r at startup", path, exc_info=True)
-            if not _is_git_url(path):
+            if not is_git_url(path):
                 await cache.start_watcher(path)
 
     init_task = asyncio.create_task(_load_and_prewarm())
@@ -151,28 +151,26 @@ async def _load_and_prewarm() -> None:
 class _IndexCache:
     """Cache of indexed repos and local paths for the lifetime of the MCP server process."""
 
-    def __init__(self, model: Encoder | None = None, content: Sequence[ContentType] = (ContentType.CODE,)) -> None:
+    def __init__(self, content: Sequence[ContentType] = (ContentType.CODE,)) -> None:
         """Initialise an empty cache."""
-        self._model: Encoder | None = model
+        self._model_path: str | None = None
         self._model_error: BaseException | None = None
         self._model_ready = asyncio.Event()
-        if model is not None:
-            self._model_ready.set()
         self._content = content
         self._tasks: OrderedDict[str, asyncio.Task[SembleIndex]] = OrderedDict()  # ordered for LRU eviction
         self._watcher_task: asyncio.Task[None] | None = None
 
-    async def _await_model(self) -> Encoder:
+    async def _await_model(self) -> str:
         """Block until the model is installed; re-raise the load error if it failed."""
         await self._model_ready.wait()
         if self._model_error is not None:
             raise self._model_error
-        assert self._model is not None
-        return self._model
+        assert self._model_path is not None
+        return self._model_path
 
     def _compute_cache_key(self, source: str, ref: str | None = None) -> str:
         """Compute the canonical cache key for a source."""
-        is_git = _is_git_url(source)
+        is_git = is_git_url(source)
         return (f"{source}@{ref}" if ref else source) if is_git else str(Path(source).resolve())
 
     def evict(self, source: str) -> None:
@@ -199,18 +197,18 @@ async def get(self, source: str, ref: str | None = None) -> SembleIndex:
         cache_key = self._compute_cache_key(source, ref)
 
         if cache_key not in self._tasks:
-            model = await self._await_model()
+            model_path = await self._await_model()
             # Re-check after the await: another caller may have populated the entry.
             if cache_key not in self._tasks:
                 if len(self._tasks) >= _CACHE_MAX_SIZE:
                     self._tasks.popitem(last=False)
-                if _is_git_url(source):
+                if is_git_url(source):
                     self._tasks[cache_key] = asyncio.create_task(
                         asyncio.to_thread(
                             SembleIndex.from_git,
                             source,
                             ref=ref,
-                            model=model,
+                            model_path=model_path,
                             content=self._content,
                         )
                     )
@@ -219,7 +217,7 @@ async def get(self, source: str, ref: str | None = None) -> SembleIndex:
                         asyncio.to_thread(
                             SembleIndex.from_path,
                             cache_key,
-                            model=model,
+                            model_path=model_path,
                             content=self._content,
                         )
                     )
diff --git a/src/semble/search.py b/src/semble/search.py
index 5b88229..f7c8fbb 100644
--- a/src/semble/search.py
+++ b/src/semble/search.py
@@ -1,12 +1,13 @@
 import bm25s
 import numpy as np
 import numpy.typing as npt
+from model2vec import StaticModel
 
 from semble.index.dense import SelectableBasicBackend
 from semble.index.sparse import selector_to_mask
 from semble.ranking import apply_query_boost, boost_multi_chunk_files, rerank_topk, resolve_alpha
 from semble.tokens import tokenize
-from semble.types import Chunk, Encoder, SearchResult
+from semble.types import Chunk, SearchResult
 
 _RRF_K = 60
 
@@ -21,7 +22,7 @@ def _rrf_scores(scores: dict[Chunk, float]) -> dict[Chunk, float]:
 
 def _search_semantic(
     query: str,
-    model: Encoder,
+    model: StaticModel,
     semantic_index: SelectableBasicBackend,
     chunks: list[Chunk],
     top_k: int,
@@ -64,7 +65,7 @@ def _search_bm25(
 
 def search(
     query: str,
-    model: Encoder,
+    model: StaticModel,
     semantic_index: SelectableBasicBackend,
     bm25_index: bm25s.BM25,
     chunks: list[Chunk],
diff --git a/src/semble/types.py b/src/semble/types.py
index 5126c3b..e6eee7e 100644
--- a/src/semble/types.py
+++ b/src/semble/types.py
@@ -1,7 +1,8 @@
-from collections.abc import Sequence
-from dataclasses import dataclass, field
+from __future__ import annotations
+
+from dataclasses import asdict, dataclass, field
 from enum import Enum
-from typing import Any, Protocol, TypeAlias
+from typing import Any, TypeAlias
 
 import numpy as np
 import numpy.typing as npt
@@ -24,19 +25,6 @@ class ContentType(str, Enum):
     CONFIG = "config"
 
 
-class Encoder(Protocol):
-    """Protocol for embedding models."""
-
-    @property
-    def dim(self) -> int:
-        """The dimensionality of the embedding."""
-        ...
-
-    def encode(self, texts: Sequence[str], /, **kwargs: Any) -> EmbeddingMatrix:
-        """Encode texts into embeddings as a 2D float32 array."""
-        ...  # pragma: no cover
-
-
 @dataclass(frozen=True, slots=True)
 class Chunk:
     """A single indexable unit of code."""
@@ -52,6 +40,15 @@ def location(self) -> str:
         """File path and line range as a string."""
         return f"{self.file_path}:{self.start_line}-{self.end_line}"
 
+    def to_dict(self) -> dict[str, Any]:
+        """Convert the dataclass to a dict."""
+        return asdict(self)
+
+    @classmethod
+    def from_dict(cls: type[Chunk], data: dict[str, Any]) -> Chunk:
+        """Create a Chunk from a dict."""
+        return cls(**data)
+
 
 @dataclass(frozen=True, slots=True)
 class SearchResult:
diff --git a/src/semble/utils.py b/src/semble/utils.py
index 89dc3f9..f8c16f1 100644
--- a/src/semble/utils.py
+++ b/src/semble/utils.py
@@ -8,12 +8,12 @@
 _SCP_GIT_URL_RE = re.compile(r"^[\w.-]+@[\w.-]+:(?!/)")
 
 
-def _is_git_url(path: str) -> bool:
+def is_git_url(path: str) -> bool:
     """Return True if path looks like a remote git URL rather than a local path."""
     return path.startswith(_GIT_URL_SCHEMES) or _SCP_GIT_URL_RE.match(path) is not None
 
 
-def _resolve_chunk(chunks: list[Chunk], file_path: str, line: int) -> Chunk | None:
+def resolve_chunk(chunks: list[Chunk], file_path: str, line: int) -> Chunk | None:
     """Return the chunk containing *line* in *file_path*, or None.
 
     Reconstructs a Chunk from its JSON-primitive MCP tool arguments (file_path + line)
@@ -29,7 +29,7 @@ def _resolve_chunk(chunks: list[Chunk], file_path: str, line: int) -> Chunk | No
     return fallback
 
 
-def _format_results(header: str, results: list[SearchResult]) -> str:
+def format_results(header: str, results: list[SearchResult]) -> str:
     """Render SearchResult objects as numbered, fenced code blocks."""
     lines: list[str] = [header, ""]
     for i, r in enumerate(results, 1):
diff --git a/tests/index/test_dense.py b/tests/index/test_dense.py
new file mode 100644
index 0000000..c846e78
--- /dev/null
+++ b/tests/index/test_dense.py
@@ -0,0 +1,17 @@
+from pathlib import Path
+
+import numpy as np
+from vicinity.backends.basic import BasicArgs
+
+from semble.index.dense import SelectableBasicBackend
+
+
+def test_save_load_roundtrip(tmp_path: Path) -> None:
+    """Test save and load roundtrip."""
+    vecs = np.random.default_rng(seed=42).normal(size=(10, 32))
+    args = BasicArgs()
+    selectable = SelectableBasicBackend(vecs, args)
+    selectable.save(tmp_path)
+
+    selectable_2 = SelectableBasicBackend.load(tmp_path)
+    assert np.allclose(selectable.vectors, selectable_2.vectors)
diff --git a/tests/test_index.py b/tests/index/test_index.py
similarity index 63%
rename from tests/test_index.py
rename to tests/index/test_index.py
index 284e729..a4d05b8 100644
--- a/tests/test_index.py
+++ b/tests/index/test_index.py
@@ -3,17 +3,19 @@
 from unittest.mock import MagicMock, patch
 
 import pytest
+from model2vec import StaticModel
 
 from semble import SembleIndex
 from semble.index.create import _MAX_FILE_BYTES, create_index_from_path
-from semble.types import ContentType, Encoder
+from semble.types import ContentType
 from tests.conftest import make_chunk
 
 
 @pytest.fixture
 def indexed_index(mock_model: Any, tmp_project: Path) -> SembleIndex:
     """SembleIndex built from tmp_project."""
-    return SembleIndex.from_path(tmp_project, model=mock_model)
+    with patch("semble.index.index.load_model", return_value=(mock_model, "")):
+        return SembleIndex.from_path(tmp_project)
 
 
 @pytest.mark.parametrize(
@@ -25,7 +27,7 @@ def indexed_index(mock_model: Any, tmp_project: Path) -> SembleIndex:
     ],
 )
 def test_index_markdown_inclusion(
-    mock_model: Encoder, tmp_project: Path, content: list[ContentType], md_in_results: bool
+    mock_model: StaticModel, tmp_project: Path, content: list[ContentType], md_in_results: bool
 ) -> None:
     """Markdown files are excluded for code-only and included when docs is requested."""
     _, _, chunks = create_index_from_path(tmp_project, mock_model, content=content)
@@ -33,37 +35,39 @@ def test_index_markdown_inclusion(
     assert has_md is md_in_results
 
 
-def test_include_text_files_deprecated(mock_model: Encoder, tmp_project: Path) -> None:
+def test_include_text_files_deprecated(mock_model: Any, tmp_project: Path) -> None:
     """include_text_files=True warns and expands to all content types; False warns and resets to code-only."""
     from semble.index.index import _ALL_CONTENT, _DEFAULT_CONTENT
 
-    with pytest.warns(DeprecationWarning, match="include_text_files is deprecated"):
-        idx = SembleIndex.from_path(tmp_project, model=mock_model, include_text_files=True)
-    assert idx._content == _ALL_CONTENT
+    with patch("semble.index.index.load_model", return_value=(mock_model, "")):
+        with pytest.warns(DeprecationWarning, match="include_text_files is deprecated"):
+            idx = SembleIndex.from_path(tmp_project, include_text_files=True)
+        assert idx._content == _ALL_CONTENT
 
-    with pytest.warns(DeprecationWarning, match="include_text_files is deprecated"):
-        idx = SembleIndex.from_path(tmp_project, model=mock_model, include_text_files=False)
-    assert idx._content == _DEFAULT_CONTENT
+        with pytest.warns(DeprecationWarning, match="include_text_files is deprecated"):
+            idx = SembleIndex.from_path(tmp_project, include_text_files=False)
+        assert idx._content == _DEFAULT_CONTENT
 
 
-def test_from_git_include_text_files_deprecated(mock_model: Encoder, tmp_project: Path) -> None:
+def test_from_git_include_text_files_deprecated(mock_model: Any, tmp_project: Path) -> None:
     """from_git raises DeprecationWarning when include_text_files is passed."""
     fake_result = MagicMock()
     fake_result.returncode = 0
-    with patch("subprocess.run", return_value=fake_result):
-        with patch("semble.index.index.create_index_from_path") as mock_create:
-            mock_create.return_value = (MagicMock(), MagicMock(), [make_chunk("x = 1", "f.py")])
-            with pytest.warns(DeprecationWarning, match="include_text_files is deprecated"):
-                SembleIndex.from_git("https://example.com/repo", model=mock_model, include_text_files=True)
+    with patch("semble.index.index.load_model", return_value=(mock_model, "")):
+        with patch("subprocess.run", return_value=fake_result):
+            with patch("semble.index.index.create_index_from_path") as mock_create:
+                mock_create.return_value = (MagicMock(), MagicMock(), [make_chunk("x = 1", "f.py")])
+                with pytest.warns(DeprecationWarning, match="include_text_files is deprecated"):
+                    SembleIndex.from_git("https://example.com/repo", include_text_files=True)
 
 
-def test_index_empty_returns_zero_chunks(mock_model: Encoder, tmp_path: Path) -> None:
+def test_index_empty_returns_zero_chunks(mock_model: StaticModel, tmp_path: Path) -> None:
     """Indexing an empty directory yields zero files and chunks."""
     with pytest.raises(ValueError):
         create_index_from_path(tmp_path, mock_model)
 
 
-def test_oversized_file_is_skipped(mock_model: Encoder, tmp_path: Path) -> None:
+def test_oversized_file_is_skipped(mock_model: StaticModel, tmp_path: Path) -> None:
     """Files exceeding _MAX_FILE_BYTES are silently skipped during indexing."""
     (tmp_path / "big.py").write_bytes(b"x" * (_MAX_FILE_BYTES + 1))
     with pytest.raises(ValueError):  # no indexable content remains
@@ -123,10 +127,10 @@ def test_search_without_reranking(indexed_index: SembleIndex) -> None:
     ],
 )
 def test_search_rerank_default_by_content_type(
-    mock_model: Encoder, content: list[ContentType], expect_rerank: bool
+    mock_model: Any, content: list[ContentType], expect_rerank: bool
 ) -> None:
     """Reranking is on by default when code is indexed, off for non-code-only content."""
-    index = SembleIndex(mock_model, MagicMock(), MagicMock(), [make_chunk("x = 1", "f.py")], content=content)
+    index = SembleIndex(mock_model, MagicMock(), MagicMock(), [make_chunk("x = 1", "f.py")], "", content=content)
     with patch("semble.index.index.search", return_value=[]) as mock_search:
         index.search("function", top_k=3)
     assert mock_search.call_args.kwargs["rerank"] == expect_rerank
@@ -170,3 +174,37 @@ def test_find_related(indexed_index: SembleIndex) -> None:
     assert [r.chunk for r in indexed_index.find_related(result, top_k=3)] == [
         r.chunk for r in indexed_index.find_related(result.chunk, top_k=3)
     ]
+
+
+def test_roundtrip(tmp_path: Path, indexed_index: SembleIndex) -> None:
+    """Test that saving and loading a folder leads to the same data."""
+    indexed_index.save(tmp_path)
+    with patch.object(StaticModel, "from_pretrained"):
+        index_2 = SembleIndex.load_from_disk(tmp_path)
+    assert index_2.chunks == indexed_index.chunks
+    assert index_2._root == indexed_index._root
+
+
+def test_load_non_existent(tmp_path: Path, indexed_index: SembleIndex) -> None:
+    """Test that saving and loading a folder leads to the same data."""
+    with pytest.raises(FileNotFoundError):
+        SembleIndex.load_from_disk(tmp_path / "temp")
+
+
+def test_load_from_disk_missing_files_reports_them(tmp_path: Path) -> None:
+    """When the directory exists but required index files are missing, the error lists them."""
+    index_dir = tmp_path / "incomplete_index"
+    index_dir.mkdir()
+    # Create only one of the four expected files so the rest are reported as missing.
+    (index_dir / "chunks.json").write_text("[]")
+
+    with pytest.raises(FileNotFoundError, match="Missing:") as exc_info:
+        SembleIndex.load_from_disk(index_dir)
+
+    error_msg = str(exc_info.value)
+    # The three missing files should all appear in the error message.
+    assert "bm25_index" in error_msg
+    assert "semantic_index" in error_msg
+    assert "metadata.json" in error_msg
+    # The file we did create should NOT be listed as missing.
+    assert "chunks.json" not in error_msg
diff --git a/tests/test_cli.py b/tests/test_cli.py
index 4153f71..7c14a50 100644
--- a/tests/test_cli.py
+++ b/tests/test_cli.py
@@ -5,7 +5,7 @@
 
 import pytest
 
-from semble.cli import Agent, _agent_path, _cli_main, _run_init, main
+from semble.cli import Agent, _agent_path, _cli_main, _run_index, _run_init, main
 from semble.types import ContentType, SearchResult
 from tests.conftest import make_chunk
 
@@ -195,6 +195,53 @@ def test_mcp_main_exits_with_message_when_extras_missing(
     assert "pip install 'semble[mcp]'" in capsys.readouterr().err
 
 
+def test_run_index(tmp_path: Path, monkeypatch: pytest.MonkeyPatch) -> None:
+    """_run_index creates the output directory and saves the index."""
+    out_dir = tmp_path / "index_output"
+    fake_index = MagicMock()
+    with patch("semble.cli.SembleIndex.from_path", return_value=fake_index) as mock_from_path:
+        _run_index(path="/some/path", include_text_files=True, out=str(out_dir))
+    mock_from_path.assert_called_once_with("/some/path", include_text_files=True)
+    assert out_dir.exists()
+    fake_index.save.assert_called_once_with(str(out_dir))
+
+
+def test_index_via_cli(tmp_path: Path, monkeypatch: pytest.MonkeyPatch) -> None:
+    """_cli_main index subcommand calls _run_index with the correct arguments."""
+    out_dir = tmp_path / "built_index"
+    fake_index = MagicMock()
+    monkeypatch.setattr(sys, "argv", ["semble", "index", "/some/path", "-o", str(out_dir)])
+    with patch("semble.cli.SembleIndex.from_path", return_value=fake_index):
+        _cli_main()
+    assert out_dir.exists()
+    fake_index.save.assert_called_once_with(str(out_dir))
+
+
+def test_index_git_via_cli(tmp_path: Path, monkeypatch: pytest.MonkeyPatch) -> None:
+    """_cli_main index subcommand calls _run_index with the correct arguments."""
+    out_dir = tmp_path / "built_index"
+    fake_index = MagicMock()
+    monkeypatch.setattr(sys, "argv", ["semble", "index", "git://xyz.git", "-o", str(out_dir)])
+    with patch("semble.cli.SembleIndex.from_git", return_value=fake_index):
+        _cli_main()
+    assert out_dir.exists()
+    fake_index.save.assert_called_once_with(str(out_dir))
+
+
+def test_cli_search_with_prebuilt_index(monkeypatch: pytest.MonkeyPatch, capsys: pytest.CaptureFixture[str]) -> None:
+    """_cli_main search with --index loads the pre-built index from disk."""
+    chunk = make_chunk("def foo(): pass", "src/foo.py")
+    fake_index = MagicMock()
+    fake_index.search.return_value = [SearchResult(chunk=chunk, score=0.95)]
+    monkeypatch.setattr(sys, "argv", ["semble", "search", "query text", ".", "--index", "/some/prebuilt"])
+    with patch("semble.cli.SembleIndex.load_from_disk", return_value=fake_index) as mock_load:
+        _cli_main()
+    mock_load.assert_called_once_with("/some/prebuilt")
+    out = capsys.readouterr().out
+    assert "query text" in out
+    assert "0.95" in out
+
+
 def test_include_text_files_cli_deprecated(
     monkeypatch: pytest.MonkeyPatch,
     capsys: pytest.CaptureFixture[str],
diff --git a/tests/test_git.py b/tests/test_git.py
index 7e25002..be0c0b8 100644
--- a/tests/test_git.py
+++ b/tests/test_git.py
@@ -39,7 +39,8 @@ def git_repo(tmp_path: Path) -> Path:
 
 def test_from_git_indexes_local_repo_with_relative_paths(mock_model: Any, git_repo: Path) -> None:
     """from_git clones a local repo, indexes it, and keeps chunk paths repo-relative."""
-    idx = SembleIndex.from_git(str(git_repo), model=mock_model)
+    with patch("semble.index.index.load_model", return_value=(mock_model, "")):
+        idx = SembleIndex.from_git(str(git_repo))
     assert idx.stats.indexed_files >= 1
     assert idx.stats.total_chunks > 0
     assert any("main.py" in c.file_path for c in idx.chunks)
@@ -54,8 +55,8 @@ def test_from_git_with_branch(mock_model: Any, tmp_path: Path) -> None:
     _commit_file(repo, "main.py", "def on_main(): pass\n", "main")
     subprocess.run(["git", "-C", str(repo), "checkout", "-b", "feature"], check=True, capture_output=True)
     _commit_file(repo, "feature.py", "def on_feature(): pass\n", "feature")
-
-    idx = SembleIndex.from_git(str(repo), ref="feature", model=mock_model)
+    with patch("semble.index.index.load_model", return_value=(mock_model, "")):
+        idx = SembleIndex.from_git(str(repo), ref="feature")
     file_names = {Path(c.file_path).name for c in idx.chunks}
     assert "feature.py" in file_names
 
@@ -73,22 +74,24 @@ def test_from_path_rejects_invalid_paths(
     else:
         target = tmp_path / "not_a_dir.py"
         target.write_text("x = 1\n")
-    with pytest.raises(expected_exc):
-        SembleIndex.from_path(target, model=mock_model)
+    with patch("semble.index.index.load_model", return_value=(mock_model, "")):
+        with pytest.raises(expected_exc):
+            SembleIndex.from_path(target)
 
 
 def test_from_git_raises_on_failure(mock_model: Any) -> None:
     """from_git raises RuntimeError when the clone fails, git is not installed, or times out."""
-    with pytest.raises(RuntimeError, match="git clone failed"):
-        SembleIndex.from_git("/nonexistent/path/that/does/not/exist", model=mock_model)
-
-    with patch("semble.index.index.subprocess.run", side_effect=FileNotFoundError):
-        with pytest.raises(RuntimeError, match="git is not installed"):
-            SembleIndex.from_git("https://github.com/x/y", model=mock_model)
-
-    with patch(
-        "semble.index.index.subprocess.run",
-        side_effect=subprocess.TimeoutExpired(cmd=["git"], timeout=60),
-    ):
-        with pytest.raises(RuntimeError, match="timed out"):
-            SembleIndex.from_git("https://github.com/x/y", model=mock_model)
+    with patch("semble.index.index.load_model", return_value=(mock_model, "")):
+        with pytest.raises(RuntimeError, match="git clone failed"):
+            SembleIndex.from_git("/nonexistent/path/that/does/not/exist")
+
+        with patch("semble.index.index.subprocess.run", side_effect=FileNotFoundError):
+            with pytest.raises(RuntimeError, match="git is not installed"):
+                SembleIndex.from_git("https://github.com/x/y")
+
+        with patch(
+            "semble.index.index.subprocess.run",
+            side_effect=subprocess.TimeoutExpired(cmd=["git"], timeout=60),
+        ):
+            with pytest.raises(RuntimeError, match="timed out"):
+                SembleIndex.from_git("https://github.com/x/y")
diff --git a/tests/test_mcp.py b/tests/test_mcp.py
index 57dd8b7..2d2494a 100644
--- a/tests/test_mcp.py
+++ b/tests/test_mcp.py
@@ -5,10 +5,11 @@
 from unittest.mock import AsyncMock, MagicMock, patch
 
 import pytest
+from model2vec import StaticModel
 
 from semble.mcp import _CACHE_MAX_SIZE, _IndexCache, create_server, serve
-from semble.types import Chunk, Encoder, SearchResult
-from semble.utils import _format_results, _is_git_url, _resolve_chunk
+from semble.types import Chunk, SearchResult
+from semble.utils import format_results, is_git_url, resolve_chunk
 from tests.conftest import make_chunk
 
 
@@ -41,7 +42,10 @@ async def _call_tool(
 @pytest.fixture()
 def cache() -> _IndexCache:
     """An _IndexCache backed by a stub model."""
-    return _IndexCache(model=MagicMock(spec=Encoder))
+    c = _IndexCache()
+    c._model_path = "/fake/model"
+    c._model_ready.set()
+    return c
 
 
 def test_resolve_chunk() -> None:
@@ -50,16 +54,16 @@ def test_resolve_chunk() -> None:
     boundary = make_chunk("last line", "src/a.py")  # start=1, end=1 (single-line)
 
     # Line strictly inside a multi-line chunk hits the early-return path.
-    assert _resolve_chunk([interior], "src/a.py", 2) is interior
+    assert resolve_chunk([interior], "src/a.py", 2) is interior
 
     # Line equal to end_line of a single-line chunk hits the fallback path.
-    assert _resolve_chunk([boundary], "src/a.py", 1) is boundary
+    assert resolve_chunk([boundary], "src/a.py", 1) is boundary
 
     # Unknown file returns None.
-    assert _resolve_chunk([interior], "src/other.py", 1) is None
+    assert resolve_chunk([interior], "src/other.py", 1) is None
 
     # Line out of range returns None.
-    assert _resolve_chunk([interior], "src/a.py", 99) is None
+    assert resolve_chunk([interior], "src/a.py", 99) is None
 
 
 @pytest.mark.parametrize(
@@ -79,18 +83,18 @@ def test_resolve_chunk() -> None:
 )
 def test_is_git_url(path: str, expected: bool) -> None:
     """Remote git URLs are detected; local paths are not."""
-    assert _is_git_url(path) is expected
+    assert is_git_url(path) is expected
 
 
 def test_format_results() -> None:
     """_format_results: empty list → header only; with results → numbered fenced blocks with scores."""
-    empty_out = _format_results("My header", [])
+    empty_out = format_results("My header", [])
     assert "My header" in empty_out
     assert "```" not in empty_out
 
     chunks = [make_chunk(f"def fn_{i}(): pass", f"f{i}.py") for i in range(3)]
     results = [SearchResult(chunk=c, score=round(0.1 * (i + 1), 3)) for i, c in enumerate(chunks)]
-    out = _format_results("Results for: 'foo'", results)
+    out = format_results("Results for: 'foo'", results)
     assert "Results for: 'foo'" in out
     assert out.count("```") >= len(results) * 2  # opening + closing fence each
     for i, c in enumerate(chunks, start=1):
@@ -266,7 +270,9 @@ async def fake_stdio() -> None:
         if stdio_yields:
             await asyncio.sleep(0.05)  # let the background init task run
 
-    load_kwargs = {"side_effect": load_err} if load_err else {"return_value": MagicMock(spec=Encoder)}
+    load_kwargs = (
+        {"side_effect": load_err} if load_err else {"return_value": (MagicMock(spec=StaticModel), "/fake/model")}
+    )
     fp_kwargs = {"side_effect": from_path_err} if from_path_err else {"return_value": MagicMock()}
     with (
         patch("semble.mcp.load_model", **load_kwargs),
@@ -284,9 +290,9 @@ async def test_serve_opens_stdio_before_model_loads() -> None:
     """Stdio must open before load_model() finishes."""
     stdio_opened = threading.Event()
 
-    def blocking_load_model() -> Encoder:
+    def blocking_load_model() -> StaticModel:
         assert stdio_opened.wait(timeout=1.0), "stdio did not open"
-        return MagicMock(spec=Encoder)
+        return MagicMock(spec=StaticModel)
 
     async def fake_run_stdio() -> None:
         stdio_opened.set()
@@ -308,7 +314,7 @@ async def test_index_cache_awaits_model(tmp_path: Path) -> None:
         get_task = asyncio.create_task(cache.get(str(tmp_path)))
         await asyncio.sleep(0.01)
         assert not get_task.done(), "get() must block until the model is installed"
-        cache._model = MagicMock(spec=Encoder)
+        cache._model_path = "/fake/model"
         cache._model_ready.set()
         result = await asyncio.wait_for(get_task, timeout=1.0)
     assert result is fake_index
diff --git a/tests/test_search.py b/tests/test_search.py
index 2f40fa6..ed605fb 100644
--- a/tests/test_search.py
+++ b/tests/test_search.py
@@ -5,12 +5,13 @@
 import numpy as np
 import numpy.typing as npt
 import pytest
+from model2vec import StaticModel
 from vicinity.backends.basic import BasicArgs
 
 from semble.index.dense import SelectableBasicBackend, embed_chunks, load_model
 from semble.search import _search_bm25, _search_semantic, _sort_top_k, search
 from semble.tokens import tokenize
-from semble.types import Chunk, Encoder
+from semble.types import Chunk
 from tests.conftest import make_chunk
 
 
@@ -139,9 +140,9 @@ def test_sort_top_k() -> None:
 )
 def test_load_model(model_path: str | None, expected_call_arg: str) -> None:
     """load_model calls from_pretrained with default or custom model path."""
-    fake_model = MagicMock(spec=Encoder)
+    fake_model = MagicMock(spec=StaticModel)
     with patch("semble.index.dense.StaticModel.from_pretrained", return_value=fake_model) as mock_fp:
-        result = load_model(model_path)
+        result, _ = load_model(model_path)
     mock_fp.assert_called_once_with(expected_call_arg, force_download=False)
     assert result is fake_model
 
diff --git a/uv.lock b/uv.lock
index a45dbf4..04d014b 100644
--- a/uv.lock
+++ b/uv.lock
@@ -10,7 +10,7 @@ resolution-markers = [
 
 [options]
 exclude-newer = "0001-01-01T00:00:00Z" # This has no effect and is included for backwards compatibility when using relative exclude-newer values.
-exclude-newer-span = "P1W"
+exclude-newer-span = "P3D"
 
 [[package]]
 name = "annotated-doc"
@@ -3123,6 +3123,7 @@ dependencies = [
     { name = "model2vec" },
     { name = "numpy", version = "2.2.6", source = { registry = "https://pypi.org/simple" }, marker = "python_full_version < '3.11'" },
     { name = "numpy", version = "2.4.4", source = { registry = "https://pypi.org/simple" }, marker = "python_full_version >= '3.11'" },
+    { name = "orjson" },
     { name = "pathspec" },
     { name = "tree-sitter" },
     { name = "tree-sitter-language-pack" },
@@ -3163,6 +3164,7 @@ requires-dist = [
     { name = "numpy", specifier = ">=1.24.0" },
     { name = "numpy", marker = "extra == 'benchmark'", specifier = ">=1.24.0" },
     { name = "openai", marker = "extra == 'benchmark'", specifier = ">=1.50" },
+    { name = "orjson" },
     { name = "pathspec", specifier = ">=0.12" },
     { name = "pre-commit", marker = "extra == 'dev'", specifier = ">=3.0" },
     { name = "pydoclint", marker = "extra == 'dev'", specifier = ">=0.5.3" },