From 5a8871223f532505c25c173a499d7e9baba94e98 Mon Sep 17 00:00:00 2001
From: Adam Rauch <adam@labkey.com>
Date: Tue, 7 Apr 2026 08:33:44 -0700
Subject: [PATCH 1/3] Log orphaned attachments action for tests

---
 src/org/labkey/test/tests/BasicTest.java      |  9 ++++++
 .../labkey/test/util/AttachmentHelper.java    | 29 +++++++++++++++++++
 src/org/labkey/test/util/Crawler.java         |  1 -
 3 files changed, 38 insertions(+), 1 deletion(-)
 create mode 100644 src/org/labkey/test/util/AttachmentHelper.java

diff --git a/src/org/labkey/test/tests/BasicTest.java b/src/org/labkey/test/tests/BasicTest.java
index 0c9f1a1dcb..fb5c2adea4 100644
--- a/src/org/labkey/test/tests/BasicTest.java
+++ b/src/org/labkey/test/tests/BasicTest.java
@@ -29,6 +29,7 @@
 import org.labkey.test.categories.Hosting;
 import org.labkey.test.categories.Smoke;
 import org.labkey.test.pages.core.admin.ShowAdminPage;
+import org.labkey.test.util.AttachmentHelper;
 import org.labkey.test.util.Order;
 
 import java.util.List;
@@ -62,6 +63,14 @@ public void testScripts()
         assertTextNotPresent("WARNING:");
     }
 
+    @Test
+    public void testOrphanedAttachments()
+    {
+        int orphanCount = AttachmentHelper.logOrphanedAttachments();
+        if (orphanCount > 0)
+            log("Orphaned attachments: " + orphanCount);
+    }
+
     @Test
     public void testStartupLogging()
     {
diff --git a/src/org/labkey/test/util/AttachmentHelper.java b/src/org/labkey/test/util/AttachmentHelper.java
new file mode 100644
index 0000000000..8f1823eaa9
--- /dev/null
+++ b/src/org/labkey/test/util/AttachmentHelper.java
@@ -0,0 +1,29 @@
+package org.labkey.test.util;
+
+import org.labkey.remoteapi.CommandException;
+import org.labkey.remoteapi.CommandResponse;
+import org.labkey.remoteapi.SimpleGetCommand;
+import org.labkey.test.WebTestHelper;
+
+import java.io.IOException;
+
+public class AttachmentHelper
+{
+    /**
+     * Tells LabKey to log the first 20 orphaned attachments it detects at the ERROR level. Returns the total number of
+     * orphaned attachments detected. Must be a root admin (site or app) to call this.
+     */
+    public static int logOrphanedAttachments()
+    {
+        SimpleGetCommand command = new SimpleGetCommand("admin", "logOrphanedAttachments");
+        try
+        {
+            CommandResponse response = command.execute(WebTestHelper.getRemoteApiConnection(), "/");
+            return response.getProperty("count");
+        }
+        catch (IOException | CommandException e)
+        {
+            throw new RuntimeException(e);
+        }
+    }
+}
diff --git a/src/org/labkey/test/util/Crawler.java b/src/org/labkey/test/util/Crawler.java
index c040dc5fca..9b7d6b8884 100644
--- a/src/org/labkey/test/util/Crawler.java
+++ b/src/org/labkey/test/util/Crawler.java
@@ -194,7 +194,6 @@ protected List<ControllerActionId> getDefaultExcludedActions()
             new ControllerActionId("login", "setPassword"),
             new ControllerActionId("ms2", "showList"),
             new ControllerActionId("ms2", "showParamsFile"),
-            new ControllerActionId("nlp", "runPipeline"),
             new ControllerActionId("pipeline-analysis", "analyze"), // Doesn't navigate
             new ControllerActionId("project", "togglePageAdminMode"),
             // Tested directly in XTandemTest

From 3ecff5ff0187cf00a7cdc417c4a5496d3068e334 Mon Sep 17 00:00:00 2001
From: Adam Rauch <adam@labkey.com>
Date: Wed, 8 Apr 2026 14:19:56 -0700
Subject: [PATCH 2/3] Remove check from BasicTest

---
 src/org/labkey/test/tests/BasicTest.java | 8 --------
 1 file changed, 8 deletions(-)

diff --git a/src/org/labkey/test/tests/BasicTest.java b/src/org/labkey/test/tests/BasicTest.java
index fb5c2adea4..bfb144bc72 100644
--- a/src/org/labkey/test/tests/BasicTest.java
+++ b/src/org/labkey/test/tests/BasicTest.java
@@ -63,14 +63,6 @@ public void testScripts()
         assertTextNotPresent("WARNING:");
     }
 
-    @Test
-    public void testOrphanedAttachments()
-    {
-        int orphanCount = AttachmentHelper.logOrphanedAttachments();
-        if (orphanCount > 0)
-            log("Orphaned attachments: " + orphanCount);
-    }
-
     @Test
     public void testStartupLogging()
     {

From 50dfd0ef9ff0fb0c3951978e16e2a7d5d3e65775 Mon Sep 17 00:00:00 2001
From: Adam Rauch <adam@labkey.com>
Date: Wed, 8 Apr 2026 14:25:47 -0700
Subject: [PATCH 3/3] Add check to DatabaseDiagnosticsTest

---
 src/org/labkey/test/tests/DatabaseDiagnosticsTest.java | 9 +++++++++
 1 file changed, 9 insertions(+)

diff --git a/src/org/labkey/test/tests/DatabaseDiagnosticsTest.java b/src/org/labkey/test/tests/DatabaseDiagnosticsTest.java
index a729e2eda4..b0877fcbe8 100644
--- a/src/org/labkey/test/tests/DatabaseDiagnosticsTest.java
+++ b/src/org/labkey/test/tests/DatabaseDiagnosticsTest.java
@@ -31,6 +31,7 @@
 import org.labkey.test.io.Grep;
 import org.labkey.test.pages.core.admin.SiteValidationPage;
 import org.labkey.test.pages.pipeline.PipelineStatusDetailsPage;
+import org.labkey.test.util.AttachmentHelper;
 import org.labkey.test.util.Maps;
 import org.labkey.test.util.Order;
 import org.labkey.test.util.PasswordUtil;
@@ -135,6 +136,14 @@ public void collectActionExceptions()
             getArtifactCollector().dumpPageSnapshot("exceptions", null);
     }
 
+    @Test
+    public void testOrphanedAttachments()
+    {
+        int orphanCount = AttachmentHelper.logOrphanedAttachments();
+        if (orphanCount > 0)
+            log("Orphaned attachments: " + orphanCount);
+    }
+
     @Override
     public List<String> getAssociatedModules()
     {