From 0ea71c6896edaf0404ea3311c09cfa5c8a8e3815 Mon Sep 17 00:00:00 2001 From: trz42 <12829274+trz42@users.noreply.github.com> Date: Wed, 21 Oct 2026 16:53:06 +0000 Subject: [PATCH] update overview of available software --- docs/available_software/detail/Kaleido.md | 41 +++++++++++++++ docs/available_software/detail/MultiQC.md | 60 ++++++++++++++++++++-- docs/available_software/detail/tiktoken.md | 40 +++++++++++++++ mkdocs.yml | 2 +- 4 files changed, 138 insertions(+), 5 deletions(-) create mode 100644 docs/available_software/detail/Kaleido.md create mode 100644 docs/available_software/detail/tiktoken.md diff --git a/docs/available_software/detail/Kaleido.md b/docs/available_software/detail/Kaleido.md new file mode 100644 index 0000000000..b0bda1bfd3 --- /dev/null +++ b/docs/available_software/detail/Kaleido.md @@ -0,0 +1,41 @@ +--- +json_ld: + '@context': https://schema.org + '@type': SoftwareApplication + applicationCategory: DeveloperApplication + description: Fast static image export for web-based visualization libraries with + zero dependencies + license: Not confirmed + name: Kaleido + offers: + '@type': Offer + price: 0 + operatingSystem: LINUX + review: + '@type': Review + author: + '@type': Organization + name: EESSI + reviewBody: Application has been successfully made available on all architectures + supported by EESSI + reviewRating: + '@type': Rating + ratingValue: 5 + softwareRequirements: See https://www.eessi.io/docs/ for how to make EESSI available + on your system + softwareVersion: '[''0.2.1'']' + url: https://github.com/plotly/Kaleido +--- +# Kaleido + + +Fast static image export for web-based visualization libraries with zero dependencies + +homepage: [https://github.com/plotly/Kaleido](https://github.com/plotly/Kaleido) + +## Available installations + + +|Kaleido version|Supported CPU targets|Supported GPU targets|EESSI version|Module| +| --- | --- | --- | --- | --- | +|0.2.1|`generic`: `aarch64`, `x86_64`
Arm: `a64fx`, `neoverse_n1`, `neoverse_v1`, `nvidia/grace`
AMD: `zen2`, `zen3`, `zen4`, `zen5`
Intel: `haswell`, `skylake_avx512`, `sapphirerapids`, `icelake`, `cascadelake`
|*(none)*|2025.06|`Kaleido/0.2.1-GCCcore-13.3.0`| \ No newline at end of file diff --git a/docs/available_software/detail/MultiQC.md b/docs/available_software/detail/MultiQC.md index e94607c402..765c5a20d0 100644 --- a/docs/available_software/detail/MultiQC.md +++ b/docs/available_software/detail/MultiQC.md @@ -25,7 +25,7 @@ json_ld: ratingValue: 5 softwareRequirements: See https://www.eessi.io/docs/ for how to make EESSI available on your system - softwareVersion: '[''1.14'']' + softwareVersion: '[''1.28'', ''1.14'']' url: https://multiqc.info --- # MultiQC @@ -43,6 +43,7 @@ Aggregate results from bioinformatics analyses across many samples into a single |MultiQC version|Supported CPU targets|Supported GPU targets|EESSI version|Module| | --- | --- | --- | --- | --- | +|1.28|`generic`: `aarch64`, `x86_64`
Arm: `a64fx`, `neoverse_n1`, `neoverse_v1`, `nvidia/grace`
AMD: `zen2`, `zen3`, `zen4`, `zen5`
Intel: `haswell`, `skylake_avx512`, `sapphirerapids`, `icelake`, `cascadelake`
|*(none)*|2025.06|`MultiQC/1.28-gfbf-2024a`| |1.14|`generic`: `aarch64`, `x86_64`
Arm: `a64fx`, `neoverse_n1`, `neoverse_v1`, `nvidia/grace`
AMD: `zen2`, `zen3`, `zen4`
Intel: `haswell`, `skylake_avx512`, `sapphirerapids`, `icelake`, `cascadelake`
|*(none)*|2023.06|`MultiQC/1.14-foss-2022b`| ## Extensions @@ -55,7 +56,7 @@ Overview of extensions included in MultiQC installations |`coloredlogs` version|MultiQC modules that include it| | --- | --- | -|15.0.1|`MultiQC/1.14-foss-2022b`| +|15.0.1|`MultiQC/1.28-gfbf-2024a`
`MultiQC/1.14-foss-2022b`| ### colormath @@ -64,6 +65,13 @@ Overview of extensions included in MultiQC installations | --- | --- | |3.0.0|`MultiQC/1.14-foss-2022b`| +### colormath2 + + +|`colormath2` version|MultiQC modules that include it| +| --- | --- | +|3.0.3|`MultiQC/1.28-gfbf-2024a`| + ### commonmark @@ -76,7 +84,14 @@ Overview of extensions included in MultiQC installations |`humanfriendly` version|MultiQC modules that include it| | --- | --- | -|10.0|`MultiQC/1.14-foss-2022b`| +|10.0|`MultiQC/1.28-gfbf-2024a`
`MultiQC/1.14-foss-2022b`| + +### humanize + + +|`humanize` version|MultiQC modules that include it| +| --- | --- | +|4.12.2|`MultiQC/1.28-gfbf-2024a`| ### lzstring @@ -92,6 +107,13 @@ Overview of extensions included in MultiQC installations | --- | --- | |3.4.1|`MultiQC/1.14-foss-2022b`| +### markdown + + +|`markdown` version|MultiQC modules that include it| +| --- | --- | +|3.7|`MultiQC/1.28-gfbf-2024a`| + ### markdown-it-py @@ -111,8 +133,23 @@ Overview of extensions included in MultiQC installations |`multiqc` version|MultiQC modules that include it| | --- | --- | +|1.28|`MultiQC/1.28-gfbf-2024a`| |1.14|`MultiQC/1.14-foss-2022b`| +### natsort + + +|`natsort` version|MultiQC modules that include it| +| --- | --- | +|8.4.0|`MultiQC/1.28-gfbf-2024a`| + +### pyaml_env + + +|`pyaml_env` version|MultiQC modules that include it| +| --- | --- | +|1.2.2|`MultiQC/1.28-gfbf-2024a`| + ### Pygments @@ -120,6 +157,13 @@ Overview of extensions included in MultiQC installations | --- | --- | |2.14.0|`MultiQC/1.14-foss-2022b`| +### python_dotenv + + +|`python_dotenv` version|MultiQC modules that include it| +| --- | --- | +|1.1.0|`MultiQC/1.28-gfbf-2024a`| + ### rich @@ -139,4 +183,12 @@ Overview of extensions included in MultiQC installations |`spectra` version|MultiQC modules that include it| | --- | --- | -|0.0.11|`MultiQC/1.14-foss-2022b`| \ No newline at end of file +|0.1.0|`MultiQC/1.28-gfbf-2024a`| +|0.0.11|`MultiQC/1.14-foss-2022b`| + +### typeguard + + +|`typeguard` version|MultiQC modules that include it| +| --- | --- | +|4.4.2|`MultiQC/1.28-gfbf-2024a`| \ No newline at end of file diff --git a/docs/available_software/detail/tiktoken.md b/docs/available_software/detail/tiktoken.md new file mode 100644 index 0000000000..f49dc55473 --- /dev/null +++ b/docs/available_software/detail/tiktoken.md @@ -0,0 +1,40 @@ +--- +json_ld: + '@context': https://schema.org + '@type': SoftwareApplication + applicationCategory: DeveloperApplication + description: tiktoken is a fast BPE tokeniser for use with OpenAI's models + license: Not confirmed + name: tiktoken + offers: + '@type': Offer + price: 0 + operatingSystem: LINUX + review: + '@type': Review + author: + '@type': Organization + name: EESSI + reviewBody: Application has been successfully made available on all architectures + supported by EESSI + reviewRating: + '@type': Rating + ratingValue: 5 + softwareRequirements: See https://www.eessi.io/docs/ for how to make EESSI available + on your system + softwareVersion: '[''0.9.0'']' + url: https://github.com/openai/tiktoken +--- +# tiktoken + + +tiktoken is a fast BPE tokeniser for use with OpenAI's models + +homepage: [https://github.com/openai/tiktoken](https://github.com/openai/tiktoken) + +## Available installations + + +|tiktoken version|Supported CPU targets|Supported GPU targets|EESSI version|Module| +| --- | --- | --- | --- | --- | +|0.9.0|`generic`: `aarch64`, `x86_64`
Arm: `a64fx`, `neoverse_n1`, `neoverse_v1`, `nvidia/grace`
AMD: `zen2`, `zen3`, `zen4`, `zen5`
Intel: `haswell`, `skylake_avx512`, `sapphirerapids`, `icelake`, `cascadelake`
|*(none)*|2025.06|`tiktoken/0.9.0-GCCcore-13.3.0`| \ No newline at end of file diff --git a/mkdocs.yml b/mkdocs.yml index 1d770a0aa6..68b17db9df 100644 --- a/mkdocs.yml +++ b/mkdocs.yml @@ -232,7 +232,7 @@ extra: icon: fontawesome/solid/rss link: https://eessi.io/docs/feed_json_created.json # this gets auto-updated via update_generated_time.sh script run in update_available_software.yml action - generated_time: "Tue, 20 Oct 2026 at 16:35:16 UTC" + generated_time: "Wed, 21 Oct 2026 at 16:53:05 UTC" slack_invite_url: "https://join.slack.com/t/eessi-hpc/shared_invite/zt-2wg10p26d-m_CnRB89xQq3zk9qxf1k3g" extra_javascript: # mermaid diagram