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CLEM database tables need to be updated #415

@tieneupin

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@tieneupin

Now that we have a better of what the CLEM workflow should be, the tables and columns will need to be updated

CLEMImageSeries and CLEMImageStack

  • Image alignment to happen in stages:
    1. Align to self, then
    2. Flatten the image stacks (if desired)
    3. Align to a reference stack
  • If possible, try and keep aligned images in memory, and save only the final product
  • Individual RGB images do not need to be created; columns can be removed
  • Bright field + fluorescent and fluorescent-only composite images are desired; create a separate database table to register these files (CLEMCompositeImages?)

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cryo-clemPart of the cryo-CLEM pipeline extensionserverRelates to the server component

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